RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 B3GNT3Q9Y2A9 372 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 SAMHD1Q9Y3Z3 626 aaKnown RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 LIPGQ9Y5X9 500 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 TNRC6AQ8NDV7 1962 aaKnown RBP4.25□□□□□ -1.73
SF3B1-208ENST00000470268 NBEAQ8NFP9 2946 aa4.25□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM72A0PK05 275 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 SH3PXD2BA1X283 911 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 OR2M5A3KFT3 312 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 MAGEA13PA6NCF6 341 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 LRRN3E7EW58 273 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 H0YC42 278 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TNFRSF11BO00300 401 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 KPNA4O00629 521 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ADAMDEC1O15204 470 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ZNHIT1O43257 154 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PIP5K1CO60331 668 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 RASAL1O95294 804 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 OPN1LWP04000 364 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 HPNP05981 417 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 HK1P19367 917 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 FUT1P19526 365 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 SRD5A2P31213 254 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF41P51814 821 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 CHN2P52757 468 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TPD52P55327 224 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 DSCR4P56555 118 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 CLDN15P56746 228 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 COPZ1P61923 177 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ST3GAL3Q11203 375 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 MERTKQ12866 999 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 LY6DQ14210 128 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TOMM20Q15388 145 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ST3GAL2Q16842 350 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 MST1LQ2TV78 715 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 SLC25A53Q5H9E4 307 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 FGD3Q5JSP0 725 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 DCST1Q5T197 706 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF770Q6IQ21 691 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 C16orf87Q6PH81 154 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 GRINAQ7Z429 371 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ZER1Q7Z7L7 766 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 GALNT5Q7Z7M9 940 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 SATL1Q86VE3 508 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 MARVELD2Q8N4S9 558 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 LINC01356Q8N9X3 169 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 OR9Q2Q8NGE9 314 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PFN4Q8NHR9 129 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 C9orf43Q8TAL5 461 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ST8SIA1Q92185 356 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TFAP2CQ92754 450 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ARL5BQ96KC2 179 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 OR2B2Q9GZK3 357 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 OR11A1Q9GZK7 315 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 YIPF3Q9GZM5 350 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 SLC6A15Q9H2J7 730 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 VCX3BQ9H321 246 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM185BQ9H7F4 350 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PTGES2Q9H7Z7 377 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 EVA1AQ9H8M9 152 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ZDHHC11Q9H8X9 412 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 REEP1Q9H902 201 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 BOKQ9UMX3 212 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ZNF337Q9Y3M9 751 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 FAM32AQ9Y421 112 aaKnown RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 CACNA1GO43497 2377 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ITPR1Q14643 2758 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 EML6Q6ZMW3 1958 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TMED7-TICAM2A0A0A6YYA0 188 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 H3BML4 177 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 GNGT2O14610 69 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 CDC42EP2O14613 210 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 NPIPB7O75200 414 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TRAPPC6AO75865 159 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 GASTP01350 101 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 THRBP10828 461 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 FCGR1AP12314 374 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PEPDP12955 493 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 GP1BBP13224 206 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 HOXB6P17509 224 aaKnown RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 FPR1P21462 350 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 EPHA2P29317 976 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 OMPP47874 163 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 STARP49675 285 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 DAPP51397 102 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 POLR2HP52434 150 aaKnown RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PPIAP62937 165 aaKnown RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PLGLB1Q02325 96 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 LTBQ06643 244 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TRAM2Q15035 370 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 MICAQ29983 383 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 PRR30Q53SZ7 412 aaPredicted RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 ZMAT1Q5H9K5 638 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 RAET1LQ5VY80 246 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 RPUSD3Q6P087 351 aaKnown RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 SHQ1Q6PI26 577 aaKnown RBP4.24□□□□□ -1.73
SF3B1-208ENST00000470268 TRILQ7L0X0 811 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 GGNQ86UU5 652 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 CYP4Z1Q86W10 505 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 SIAH3Q8IW03 269 aa4.24□□□□□ -1.73
SF3B1-208ENST00000470268 NRMQ8IXM6 262 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms