RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 CALHM2Q9HA72 323 aa10.03□□□□□ -0.8
SREBF1-209ENST00000470247 SLC25A19Q9HC21 320 aa10.03□□□□□ -0.8
SREBF1-209ENST00000470247 NRIP3Q9NQ35 241 aa10.03□□□□□ -0.8
SREBF1-209ENST00000470247 FAM118AQ9NWS6 357 aa10.03□□□□□ -0.8
SREBF1-209ENST00000470247 KLHL13Q9P2N7 655 aa10.03□□□□□ -0.8
SREBF1-209ENST00000470247 RASD1Q9Y272 281 aa10.03□□□□□ -0.8
SREBF1-209ENST00000470247 FAM215AQ9Y5M1 114 aa10.03□□□□□ -0.8
SREBF1-209ENST00000470247 KMT2BQ9UMN6 2715 aaPredicted RBP10.03□□□□□ -0.8
SREBF1-209ENST00000470247 RP1L1Q8IWN7 2480 aaPredicted RBP10.02□□□□□ -0.8
SREBF1-209ENST00000470247 IGKV3D-15A0A087WSY6 115 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 CD8B2A6NJW9 211 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 SLC16A6O15403 523 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 SLC19A2O60779 497 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 C1QL1O75973 258 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 VAMP5O95183 116 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 IGHMP01871 453 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 TPOP07202 933 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 ABOP16442 354 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 AHCYP23526 432 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 POU1F1P28069 291 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 GTF2E2P29084 291 aaKnown RBP10.02□□□□□ -0.81
SREBF1-209ENST00000470247 ERVK-25P63136 954 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 EFNB1P98172 346 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 GUSBP1Q15486 140 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 SLX4IPQ5VYV7 408 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 NSUN5P2Q63ZY6 315 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 TMEM225Q6GV28 225 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 RPL13AP3Q6NVV1 102 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 ZNF585AQ6P3V2 769 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 IZUMO2Q6UXV1 221 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 RPTNQ6XPR3 784 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 CREB3L2Q70SY1 520 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 CCDC71Q8IV32 467 aaPredicted RBP10.02□□□□□ -0.81
SREBF1-209ENST00000470247 SLC43A2Q8N370 569 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 LNX2Q8N448 690 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 RPRMLQ8N4K4 120 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 OR9K2Q8NGE7 335 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 TFAP2CQ92754 450 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 ZHX1-C8orf76Q96EF9 292 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 TXNDC15Q96J42 360 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 HRASLS5Q96KN8 279 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 Q96M85 177 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 ZNF385AQ96PM9 386 aaKnown RBP10.02□□□□□ -0.81
SREBF1-209ENST00000470247 DDOQ99489 341 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 PITX2Q99697 317 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 KATNB1Q9BVA0 655 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 RIBC2Q9H4K1 309 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 RNF122Q9H9V4 155 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 INIPQ9NRY2 104 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 ZNF346Q9UL40 294 aaKnown RBP10.02□□□□□ -0.81
SREBF1-209ENST00000470247 MCTS1Q9ULC4 181 aaKnown RBP10.02□□□□□ -0.81
SREBF1-209ENST00000470247 NDRG4Q9ULP0 352 aaKnown RBP10.02□□□□□ -0.81
SREBF1-209ENST00000470247 ADAM18Q9Y3Q7 739 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 NBEAQ8NFP9 2946 aa10.02□□□□□ -0.81
SREBF1-209ENST00000470247 MED12LQ86YW9 2145 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 PRRC2CQ9Y520 2896 aaKnown RBP10.01□□□□□ -0.81
SREBF1-209ENST00000470247 LOC100130705A0A1B0GUX0 176 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 MBD3L4A6NDZ8 208 aaPredicted RBP10.01□□□□□ -0.81
SREBF1-209ENST00000470247 MBD3L3A6NE82 208 aaPredicted RBP10.01□□□□□ -0.81
SREBF1-209ENST00000470247 MBD3L5A6NJ08 208 aaPredicted RBP10.01□□□□□ -0.81
SREBF1-209ENST00000470247 NPIPB13A6NJU9 1138 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 SLC22A20A6NK97 555 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 NPIPB4C9JG80 1138 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 H3BN98 237 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ARPC3O15145 178 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 RNF13O43567 381 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 WDR1O75083 606 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ZNF432O94892 652 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 TOXO94900 526 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 OR6A2O95222 327 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 SYNGR4O95473 234 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 PPP1R3DO95685 299 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 TXNDC12O95881 172 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 APEHP13798 732 aaKnown RBP10.01□□□□□ -0.81
SREBF1-209ENST00000470247 GABRA1P14867 456 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 IFNGR1P15260 489 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ACVR2AP27037 513 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 SLC6A6P31641 620 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 PTGER4P35408 488 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 RUNX1T1Q06455 604 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 RASGEF1BQ0VAM2 473 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ACKR1Q16570 336 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 PGGHGQ32M88 737 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ARMC4Q5T2S8 1044 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 C12orf73Q69YU5 71 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 USP51Q70EK9 711 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 CHMP1BQ7LBR1 199 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ZNF843Q8N446 348 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 DHRSXQ8N5I4 330 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 C9orf106Q8NAJ2 232 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 MBD3L2Q8NHZ7 208 aaPredicted RBP10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ZNF519Q8TB69 540 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 TEX47Q8TBZ9 253 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 WNT2BQ93097 391 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 UBE2FQ969M7 185 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ZNF775Q96BV0 537 aaPredicted RBP10.01□□□□□ -0.81
SREBF1-209ENST00000470247 ZNF570Q96NI8 536 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 TSPAN32Q96QS1 320 aa10.01□□□□□ -0.81
SREBF1-209ENST00000470247 TRIB1Q96RU8 372 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms