RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 GGTLC2Q14390 218 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 GCNT6Q5T4J0 391 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 REEP3Q6NUK4 255 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 DHRS4L2Q6PKH6 230 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 H1FNTQ75WM6 255 aaPredicted RBP15.19■□□□□ 0.02
COL7A1-208ENST00000470076 PHC2Q8IXK0 858 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 PIK3C3Q8NEB9 887 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 NUP37Q8NFH4 326 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 ZNF417Q8TAU3 575 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 TAAR8Q969N4 342 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 C7orf26Q96N11 449 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 ZNF587Q96SQ5 575 aaPredicted RBP15.19■□□□□ 0.02
COL7A1-208ENST00000470076 SHARPINQ9H0F6 387 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 PLK3Q9H4B4 646 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 GPR35Q9HC97 309 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 SLC25A37Q9NYZ2 338 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 SEC14L4Q9UDX3 406 aa15.19■□□□□ 0.02
COL7A1-208ENST00000470076 TRAV36DV7A0A075B6V5 113 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 LMX1BO60663 402 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 ERLIN1O75477 346 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 HTR2AP28223 471 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 GRPRP30550 384 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 CALCRP30988 508 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 ARR3P36575 388 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 PPOXP50336 477 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 CDK6Q00534 326 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 MFSD13AQ14CX5 517 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 ALG10BQ5I7T1 473 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 FAM91A1Q658Y4 838 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 ULK3Q6PHR2 472 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 BLOC1S3Q6QNY0 202 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 VHLLQ6RSH7 139 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 FUNDC1Q8IVP5 155 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 MSRB3Q8IXL7 192 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 CCDC36Q8IYA8 594 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 ANKS4BQ8N8V4 417 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 ZNF540Q8NDQ6 660 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 ADPRHL1Q8NDY3 354 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 NFKBIDQ8NI38 313 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 RSPO3Q9BXY4 272 aaPredicted RBP15.18■□□□□ 0.02
COL7A1-208ENST00000470076 ZNF442Q9H7R0 627 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 CRLF2Q9HC73 371 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 GMEB1Q9Y692 573 aa15.18■□□□□ 0.02
COL7A1-208ENST00000470076 IGKV1D-42A0A075B6H8 117 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 PHF1O43189 567 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-208ENST00000470076 TRAF3IP2O43734 574 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-208ENST00000470076 IDH3GP51553 393 aaPredicted RBP15.17■□□□□ 0.02
COL7A1-208ENST00000470076 NCALDP61601 193 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 HGFACQ04756 655 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 CARTPTQ16568 116 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 CEACAM16Q2WEN9 425 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 FAM166AQ6J272 317 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 TMEM123Q8N131 208 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 IL17RDQ8NFM7 739 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 OR6S1Q8NH40 331 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 SPDL1Q96EA4 605 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 SLC47A1Q96FL8 570 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 FOXN4Q96NZ1 517 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 OR2M2Q96R28 347 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 RAB1BQ9H0U4 201 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 SEC61A2Q9H9S3 476 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 SELENONQ9NZV5 590 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 CCDC167Q9P0B6 97 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 SLAMF8Q9P0V8 285 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 KLHL14Q9P2G3 628 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 TESQ9UGI8 421 aaKnown RBP15.17■□□□□ 0.02
COL7A1-208ENST00000470076 KCNS2Q9ULS6 477 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 CORO2BQ9UQ03 480 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 CORINQ9Y5Q5 1042 aa15.17■□□□□ 0.02
COL7A1-208ENST00000470076 SVEP1Q4LDE5 3571 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 PRORSD1PA6NEY8 169 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 ZNF99A8MXY4 864 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-208ENST00000470076 CELA3BP08861 270 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 APEHP13798 732 aaKnown RBP15.16■□□□□ 0.02
COL7A1-208ENST00000470076 NPR2P20594 1047 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 THBS2P35442 1172 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 IDH3AP50213 366 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 IL1RL1Q01638 556 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 COMTD1Q86VU5 262 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 UEVLDQ8IX04 471 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 C10orf111Q8N326 155 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 BHLHE22Q8NFJ8 381 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-208ENST00000470076 ZNF837Q96EG3 531 aaPredicted RBP15.16■□□□□ 0.02
COL7A1-208ENST00000470076 SLC41A3Q96GZ6 507 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 ANKRD27Q96NW4 1050 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 ZNF607Q96SK3 696 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 EPYCQ99645 322 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 CCDC28BQ9BUN5 200 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 PRR14Q9BWN1 585 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 TMEM38AQ9H6F2 299 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 EVA1AQ9H8M9 152 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 TMEM27Q9HBJ8 222 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 VAPAQ9P0L0 249 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 USP22Q9UPT9 525 aa15.16■□□□□ 0.02
COL7A1-208ENST00000470076 A0A087WUJ7 227 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 TRBV5-3A0A0A0MS03 114 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 IGHV2OR16-5A0A0B4J2B6 119 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 IGHV4-61A0A0C4DH41 118 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 LOC100289279A0A1B0GTE1 492 aa15.15■□□□□ 0.02
COL7A1-208ENST00000470076 EVPLLA8MZ36 301 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms