RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 PBX4Q9BYU1 374 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 OR10A5Q9H207 317 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 HCN3Q9P1Z3 774 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 MRPS33Q9Y291 106 aaKnown RBP12.44□□□□□ -0.42
BRCA1-209ENST00000470026 ETV7Q9Y603 341 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 EPOPA6NHQ4 379 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 SSNA1O43805 119 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 SRPX2O60687 465 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-209ENST00000470026 MPC2O95563 127 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 TACSTD2P09758 323 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 ASAH2BP0C7U1 165 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 CPN1P15169 458 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 ADRA2CP18825 462 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 CSRP1P21291 193 aaKnown RBP12.44□□□□□ -0.42
BRCA1-209ENST00000470026 SDHAP31040 664 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 AQP2P41181 271 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 SELENOPP49908 381 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 SCAND1P57086 179 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 HYAL1Q12794 435 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 ALKBH1Q13686 389 aaKnown RBP12.44□□□□□ -0.42
BRCA1-209ENST00000470026 CLLU1Q5K131 121 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 C9orf50Q5SZB4 431 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 METTL11BQ5VVY1 283 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 SFRP4Q6FHJ7 346 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-209ENST00000470026 WBP2NLQ6ICG8 309 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 Q6ZTK2 550 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 LRRTM1Q86UE6 522 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 CDC20BQ86Y33 519 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 SPICQ8N5J4 248 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 AVL9Q8NBF6 648 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 UXS1Q8NBZ7 420 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 MIB2Q96AX9 1013 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF285Q96NJ3 590 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 GAS2L1Q99501 681 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-209ENST00000470026 SMAD5Q99717 465 aaKnown RBP12.44□□□□□ -0.42
BRCA1-209ENST00000470026 S1PR5Q9H228 398 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 EXOSC3Q9NQT5 275 aaKnown RBP12.44□□□□□ -0.42
BRCA1-209ENST00000470026 FLVCR2Q9UPI3 526 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 KLHDC2Q9Y2U9 406 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 TMEM131Q92545 1883 aa12.44□□□□□ -0.42
BRCA1-209ENST00000470026 NSA2O95478 260 aaKnown RBP12.43□□□□□ -0.42
BRCA1-209ENST00000470026 IGHV4-34P06331 123 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 DRD1P21728 446 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 MAPK3P27361 379 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-209ENST00000470026 CFPP27918 469 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 GRK6P43250 576 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 MAGEB1P43366 347 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 P2RX1P51575 399 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 SKP1P63208 163 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 BTG2P78543 158 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 RFPL4BQ6ZWI9 263 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF761Q86XN6 746 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF511Q8NB15 262 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 OR6C4Q8NGE1 309 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 SYNPRQ8TBG9 265 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 C15orf40Q8WUR7 153 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 FCAMRQ8WWV6 532 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 S100A16Q96FQ6 103 aaKnown RBP12.43□□□□□ -0.42
BRCA1-209ENST00000470026 TSPAN10Q9H1Z9 355 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-209ENST00000470026 MMP25Q9NPA2 562 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 KLK11Q9UBX7 282 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 ERVK-19Q9WJR5 959 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 CDH23Q9H251 3354 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 A0A087WV48 116 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 TRBV5-7A0A0A0MS05 114 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 C4orf47A7E2U8 309 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 PRAMEF26H0Y7S4 382 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 CLDN4O14493 209 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 ICMTO60725 284 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 IFNA16P05015 189 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 IL5P05113 134 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 M6PRP20645 277 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 PBX2P40425 430 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 VEGFCP49767 419 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 HHEXQ03014 270 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 EGR4Q05215 589 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 LTBQ06643 244 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 PUDPQ08623 228 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 SKP2Q13309 424 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 SNTA1Q13424 505 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 NNATQ16517 81 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 EMC4Q5J8M3 183 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 TOR2AQ5JU69 321 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 LIPNQ5VXI9 398 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 GLDNQ6ZMI3 551 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-209ENST00000470026 DND1Q8IYX4 353 aaKnown RBP12.43□□□□□ -0.42
BRCA1-209ENST00000470026 ZNF784Q8NCA9 323 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-209ENST00000470026 GCDHQ92947 438 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-209ENST00000470026 MNTQ99583 582 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 GLTPQ9NZD2 209 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 FRRS1LQ9P0K9 344 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 PIPOXQ9P0Z9 390 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 OR10H1Q9Y4A9 318 aa12.43□□□□□ -0.42
BRCA1-209ENST00000470026 SPTY2D1-AS1A0A0U1RR47 76 aa12.42□□□□□ -0.42
BRCA1-209ENST00000470026 A0A1B0GVT2 93 aa12.42□□□□□ -0.42
BRCA1-209ENST00000470026 TMEM72A0PK05 275 aa12.42□□□□□ -0.42
BRCA1-209ENST00000470026 ELOA3DA6NLF2 546 aaPredicted RBP12.42□□□□□ -0.42
BRCA1-209ENST00000470026 HSPB2A8KAH6 182 aa12.42□□□□□ -0.42
BRCA1-209ENST00000470026 ACOT7O00154 380 aa12.42□□□□□ -0.42
BRCA1-209ENST00000470026 PSMD9O00233 223 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms