RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SLC43A1O75387 559 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 SERPINB7O75635 380 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 HPRP00739 348 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 IGKV3-15P01624 115 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 BGLAPP02818 100 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 CECR9P0C854 216 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 HOXB1P14653 301 aaPredicted RBP14.19□□□□□ -0.14
COL9A3-208ENST00000469802 NCALDP61601 193 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 TUBA1BP68363 451 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 TUBA4AP68366 448 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 NAAAQ02083 359 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 SELPLGQ14242 412 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 MFSD13AQ14CX5 517 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 RAB35Q15286 201 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 OR1Q1Q15612 314 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 HMBOX1Q6NT76 420 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 CLEC2AQ6UVW9 174 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 NHLRC1Q6VVB1 395 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 TUBA1AQ71U36 451 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 H1FNTQ75WM6 255 aaPredicted RBP14.19□□□□□ -0.14
COL9A3-208ENST00000469802 ARMC8Q8IUR7 673 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 ZNF525Q8N782 197 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 SCAIQ8N9R8 606 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 C11orf65Q8NCR3 313 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 ANKRD27Q96NW4 1050 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 OR2M2Q96R28 347 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 GPR35Q9HC97 309 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 MOV10Q9HCE1 1003 aaKnown RBP14.19□□□□□ -0.14
COL9A3-208ENST00000469802 CORINQ9Y5Q5 1042 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 CUBNO60494 3623 aa14.19□□□□□ -0.14
COL9A3-208ENST00000469802 ATRQ13535 2644 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 A0A096LPE4 126 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 A0A1W2PPZ6 126 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 MS4A18H0YCH9 400 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 FMO6PO60774 539 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 BMP4P12644 408 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 H2AFXP16104 143 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-208ENST00000469802 EFNA4P52798 201 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 UBE2NP61088 152 aaKnown RBP14.18□□□□□ -0.14
COL9A3-208ENST00000469802 ARF1P84077 181 aaKnown RBP14.18□□□□□ -0.14
COL9A3-208ENST00000469802 CHRNB3Q05901 458 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 RBBP4Q09028 425 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 MS4A18Q3C1V0 323 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 HDXQ7Z353 690 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 MYPOPQ86VE0 399 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-208ENST00000469802 RANBP3LQ86VV4 465 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-208ENST00000469802 TSPEARQ8WU66 669 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 ZNF837Q96EG3 531 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-208ENST00000469802 MOGAT1Q96PD6 335 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 EPYCQ99645 322 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 CGREF1Q99674 301 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 ARHGDIGQ99819 225 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 TMEM43Q9BTV4 400 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 SEC61A2Q9H9S3 476 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 TMEM27Q9HBJ8 222 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 CA10Q9NS85 328 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 NDUFAF1Q9Y375 327 aa14.18□□□□□ -0.14
COL9A3-208ENST00000469802 ZNF503-AS2A6NEH8 195 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 ANGPT2O15123 496 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 AKAP8O43823 692 aaKnown RBP14.17□□□□□ -0.14
COL9A3-208ENST00000469802 EDF1O60869 148 aaKnown RBP14.17□□□□□ -0.14
COL9A3-208ENST00000469802 PDE5AO76074 875 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 CRYAAP02489 173 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 TP53P04637 393 aaPredicted RBP14.17□□□□□ -0.14
COL9A3-208ENST00000469802 CSF3P09919 207 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 HLA-DOBP13765 273 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 CDH12P55289 794 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 MTPNP58546 118 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 LOXL1Q08397 574 aaPredicted RBP14.17□□□□□ -0.14
COL9A3-208ENST00000469802 C1DQ13901 141 aaKnown RBP14.17□□□□□ -0.14
COL9A3-208ENST00000469802 NPTX1Q15818 432 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 DUSP7Q16829 419 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 CEACAM16Q2WEN9 425 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 ZNF613Q6PF04 617 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 LINC00114Q6XXX2 140 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 SMYD1Q8NB12 490 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 PIK3C3Q8NEB9 887 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 GPR32P1Q8NGA4 272 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 C10orf105Q8TEF2 133 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 THOC1Q96FV9 657 aaKnown RBP14.17□□□□□ -0.14
COL9A3-208ENST00000469802 SIKE1Q9BRV8 207 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 KAT8Q9H7Z6 458 aaKnown RBP14.17□□□□□ -0.14
COL9A3-208ENST00000469802 CRLF2Q9HC73 371 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 MRPL39Q9NYK5 338 aaKnown RBP14.17□□□□□ -0.14
COL9A3-208ENST00000469802 SLC13A4Q9UKG4 626 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 TRIM33Q9UPN9 1127 aa14.17□□□□□ -0.14
COL9A3-208ENST00000469802 MALRD1Q5VYJ5 2156 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 ZNF99A8MXY4 864 aaPredicted RBP14.16□□□□□ -0.14
COL9A3-208ENST00000469802 M0R3H8 397 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 CHP2O43745 196 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 GPRIN2O60269 458 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 C8BP07358 591 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 CELA3BP08861 270 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 CBR1P16152 277 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 SLC25A16P16260 332 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 CBLP22681 906 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 CALCRP30988 508 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 PCGF2P35227 344 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 EFNB3Q15768 340 aa14.16□□□□□ -0.14
COL9A3-208ENST00000469802 ADIPOQQ15848 244 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms