RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 UBASH3BQ8TF42 649 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 CKAP2Q8WWK9 683 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 TXNDC15Q96J42 360 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 OXGR1Q96P68 337 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF587Q96SQ5 575 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-204ENST00000469207 ZBTB18Q99592 522 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 NARFLQ9H6Q4 476 aa10.59□□□□□ -0.71
HDAC3-204ENST00000469207 SSU72Q9NP77 194 aaKnown RBP10.59□□□□□ -0.71
HDAC3-204ENST00000469207 MYOZ1Q9NP98 299 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-204ENST00000469207 IGKV1D-42A0A075B6H8 117 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 A0A0G2JPF8 293 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 HNRNPCL2B2RXH8 293 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 HNRNPCL3B7ZW38 293 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 WNT9BO14905 357 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 HDAC3O15379 428 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 TPST1O60507 370 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 HNRNPCL1O60812 293 aaKnown RBP10.58□□□□□ -0.72
HDAC3-204ENST00000469207 SLC43A1O75387 559 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 IL6P05231 212 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 HNRNPCL4P0DMR1 293 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 IFNGR1P15260 489 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 HTR2AP28223 471 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 SRP14P37108 136 aaKnown RBP10.58□□□□□ -0.72
HDAC3-204ENST00000469207 CHN2P52757 468 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 SEC24CP53992 1094 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 TXNL4AP83876 142 aaKnown RBP10.58□□□□□ -0.72
HDAC3-204ENST00000469207 IL1RL1Q01638 556 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 SNTB2Q13425 540 aaKnown RBP10.58□□□□□ -0.72
HDAC3-204ENST00000469207 RIN1Q13671 783 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 C1DQ13901 141 aaKnown RBP10.58□□□□□ -0.72
HDAC3-204ENST00000469207 DAG1Q14118 895 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 C3orf36Q3SXR2 165 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 GLIPR1L2Q4G1C9 344 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 TNFAIP8L3Q5GJ75 292 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 CEP85LQ5SZL2 805 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 RINLQ6ZS11 566 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 MAVSQ7Z434 540 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 C10orf111Q8N326 155 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 GPR137CQ8N3F9 429 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-204ENST00000469207 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 MGARPQ8TDB4 240 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 OR2M2Q96R28 347 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 OR52B2Q96RD2 323 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 WFDC6Q9BQY6 131 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 MRPL37Q9BZE1 423 aaKnown RBP10.58□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF442Q9H7R0 627 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 B3GNT2Q9NY97 397 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 CALML5Q9NZT1 146 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 FZR1Q9UM11 496 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 PCDHB14Q9Y5E9 798 aa10.58□□□□□ -0.72
HDAC3-204ENST00000469207 A0A096LPI6 279 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 LRRN3E7EW58 273 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 TCF21O43680 179 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 TRAF3IP2O43734 574 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 SNNO75324 88 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 RGS9O75916 674 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 SNUPNO95149 360 aaKnown RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 HPXP02790 462 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 PATE4P0C8F1 98 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 ZCCHC18P0CG32 403 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 CD79AP11912 226 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 ARR3P36575 388 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 ALDH3B1P43353 468 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 CDH15P55291 814 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 LRRC74AQ0VAA2 488 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 RGNQ15493 299 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 PDCD4Q53EL6 469 aaKnown RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 C6orf10Q5SRN2 563 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 HHATQ5VTY9 493 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 WDR93Q6P2C0 686 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 SLC2A7Q6PXP3 512 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 H1FNTQ75WM6 255 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 TMEM123Q8N131 208 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 FAM169BQ8N8A8 192 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 GLB1L3Q8NCI6 653 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 NEU4Q8WWR8 484 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF75AQ96N20 296 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 ANKRD27Q96NW4 1050 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 SYT3Q9BQG1 590 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 PAIP1Q9H074 479 aaKnown RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 LPAR2Q9HBW0 351 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 DYNLRB1Q9NP97 96 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 MED29Q9NX70 200 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 SLAMF8Q9P0V8 285 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 MYEF2Q9P2K5 600 aaKnown RBP10.57□□□□□ -0.72
HDAC3-204ENST00000469207 IFT52Q9Y366 437 aa10.57□□□□□ -0.72
HDAC3-204ENST00000469207 A0A1B0GWA3 101 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 ZNF99A8MXY4 864 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-204ENST00000469207 FAM157AC9JC47 383 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 CLIC1O00299 241 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 AIM2O14862 343 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 VENTXO95231 258 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 NR4A1P22736 598 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 GTF2E2P29084 291 aaKnown RBP10.56□□□□□ -0.72
HDAC3-204ENST00000469207 POLR2JP52435 117 aaKnown RBP10.56□□□□□ -0.72
HDAC3-204ENST00000469207 SH3BGRP55822 239 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-204ENST00000469207 CAMK2DQ13557 499 aa10.56□□□□□ -0.72
HDAC3-204ENST00000469207 MAD2L1BPQ15013 274 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms