RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 APEHP13798 732 aaKnown RBP11.49□□□□□ -0.57
RUNX1-213ENST00000469087 ZNF708P17019 499 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 ENPP1P22413 925 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 RAC3P60763 192 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 CXCR4P61073 352 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 CSNK2A1P68400 391 aaPredicted RBP11.49□□□□□ -0.57
RUNX1-213ENST00000469087 SRYQ05066 204 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 ZNF239Q16600 458 aaKnown RBP11.49□□□□□ -0.57
RUNX1-213ENST00000469087 OCLNQ16625 522 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 RBM48Q5RL73 367 aaKnown RBP11.49□□□□□ -0.57
RUNX1-213ENST00000469087 TMEM201Q5SNT2 666 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 HBMQ6B0K9 141 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 VASNQ6EMK4 673 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 TMEM225Q6GV28 225 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 RPUSD3Q6P087 351 aaKnown RBP11.49□□□□□ -0.57
RUNX1-213ENST00000469087 PAQR6Q6TCH4 344 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 NHLRC1Q6VVB1 395 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 PXKQ7Z7A4 578 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 CPOQ8IVL8 374 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 KDF1Q8NAX2 398 aaPredicted RBP11.49□□□□□ -0.57
RUNX1-213ENST00000469087 OR52E2Q8NGJ4 325 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 OR4K13Q8NH42 304 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 RASD2Q96D21 266 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 UCN2Q96RP3 112 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 DDOQ99489 341 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 TIMP4Q99727 224 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 HCAR1Q9BXC0 346 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 YTHDF1Q9BYJ9 559 aaKnown RBP11.49□□□□□ -0.57
RUNX1-213ENST00000469087 HINT3Q9NQE9 182 aaKnown RBP11.49□□□□□ -0.57
RUNX1-213ENST00000469087 DNAJC27Q9NZQ0 273 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 LUZP4Q9P127 313 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 GRHPRQ9UBQ7 328 aa11.49□□□□□ -0.57
RUNX1-213ENST00000469087 CHD8Q9HCK8 2581 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 IGHV3-15A0A0B4J1V0 119 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 TEX13CA0A0J9YWL9 993 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 AQP7P3A6NL99 342 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 PTGES3LE9PB15 166 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 IMPA2O14732 288 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 CXCL13O43927 109 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 ACTL6AO96019 429 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 IGHG3P01860 377 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 SDHAP31040 664 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 CDKN2AP42771 156 aaKnown RBP11.48□□□□□ -0.57
RUNX1-213ENST00000469087 EIF1AXP47813 144 aaKnown RBP11.48□□□□□ -0.57
RUNX1-213ENST00000469087 AGFG1P52594 562 aaKnown RBP11.48□□□□□ -0.57
RUNX1-213ENST00000469087 NUDT6P53370 316 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 TEKQ02763 1124 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 ITGADQ13349 1161 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 TOP3AQ13472 1001 aaPredicted RBP11.48□□□□□ -0.57
RUNX1-213ENST00000469087 ACKR1Q16570 336 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 NADK2Q4G0N4 442 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 AADACL4Q5VUY2 407 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 ARHGAP11AQ6P4F7 1023 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 CYB561A3Q8NBI2 242 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 SLC37A3Q8NCC5 494 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 ADPRHL1Q8NDY3 354 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 ANKK1Q8NFD2 765 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 OR10D3Q8NH80 312 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 OR2V1Q8NHB1 315 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 SGCDQ92629 289 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 ZNF845Q96IR2 970 aaPredicted RBP11.48□□□□□ -0.57
RUNX1-213ENST00000469087 ZNF582Q96NG8 517 aaPredicted RBP11.48□□□□□ -0.57
RUNX1-213ENST00000469087 RHNO1Q9BSD3 238 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 ZNF696Q9H7X3 374 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 MED20Q9H944 212 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 PLCXD1Q9NUJ7 323 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 CLN6Q9NWW5 311 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 SPRR3Q9UBC9 169 aa11.48□□□□□ -0.57
RUNX1-213ENST00000469087 DSPP15924 2871 aaKnown RBP11.48□□□□□ -0.57
RUNX1-213ENST00000469087 PRRC2CQ9Y520 2896 aaKnown RBP11.48□□□□□ -0.57
RUNX1-213ENST00000469087 SPENQ96T58 3664 aaKnown RBP11.47□□□□□ -0.57
RUNX1-213ENST00000469087 KIAA1549Q9HCM3 1950 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 CACNA1GO43497 2377 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 TMEM8BA6NDV4 472 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 TRIM64A6NGJ6 449 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 EIF1BO60739 113 aaKnown RBP11.47□□□□□ -0.57
RUNX1-213ENST00000469087 CCDC159P0C7I6 412 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 RPL27P61353 136 aaKnown RBP11.47□□□□□ -0.57
RUNX1-213ENST00000469087 CSNK2BP67870 215 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.47□□□□□ -0.57
RUNX1-213ENST00000469087 CRMP1Q14194 572 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 PLBD1Q6P4A8 553 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 GPAT4Q86UL3 456 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 SIAH3Q8IW03 269 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 WDFY1Q8IWB7 410 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 LSM14AQ8ND56 463 aaKnown RBP11.47□□□□□ -0.57
RUNX1-213ENST00000469087 NPEPL1Q8NDH3 523 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 SDR9C7Q8NEX9 313 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 BBS1Q8NFJ9 593 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 ZNF566Q969W8 418 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 TXNDC15Q96J42 360 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 Q96MT0 163 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 NMNAT3Q96T66 252 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 ARHGAP9Q9BRR9 750 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 TXNIPQ9H3M7 391 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 FN3KQ9H479 309 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 EXO5Q9H790 373 aa11.47□□□□□ -0.57
RUNX1-213ENST00000469087 PAK1IP1Q9NWT1 392 aaPredicted RBP11.47□□□□□ -0.57
RUNX1-213ENST00000469087 A0A1W2PNV4 684 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms