RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 IGHV1OR21-1A0A087WYE8 117 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 IQANK1A0A1B0GTG1 560 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 TMEM110-MUSTN1A8MSY1 372 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 A8MXQ7 604 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 MBTPS2O43462 519 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 SNX4O95219 450 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 CLDN9O95484 217 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 SERPINA3P01011 423 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 ATP6V1B2P21281 511 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 SHMT2P34897 504 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 KLK7P49862 253 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 HMGN5P82970 282 aaKnown RBP3.57□□□□□ -1.84
LSM5-209ENST00000468872 CDK16Q00536 496 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 FILIP1LQ4L180 1135 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 FRMPD3Q5JV73 1810 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 OR52E8Q6IFG1 317 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 C11orf53Q8IXP5 236 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 ZNF100Q8IYN0 542 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 RDH10Q8IZV5 341 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 FTMTQ8N4E7 242 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 TRPV1Q8NER1 839 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 MARC2Q969Z3 335 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 PAGE5Q96GU1 130 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 OXGR1Q96P68 337 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 ARHGDIGQ99819 225 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 EBF4Q9BQW3 602 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 SLC39A3Q9BRY0 314 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 SUDS3Q9H7L9 328 aaPredicted RBP3.57□□□□□ -1.84
LSM5-209ENST00000468872 ZDHHC11Q9H8X9 412 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 FOLH1BQ9HBA9 442 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 ZNF639Q9UID6 485 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 KIF25Q9UIL4 384 aa3.57□□□□□ -1.84
LSM5-209ENST00000468872 RRP15Q9Y3B9 282 aaKnown RBP3.57□□□□□ -1.84
LSM5-209ENST00000468872 PTPN13Q12923 2485 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 LRRK1Q38SD2 2015 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 UBR1Q8IWV7 1749 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 PLEKHH1Q9ULM0 1364 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 ANKRD17O75179 2603 aaKnown RBP3.56□□□□□ -1.84
LSM5-209ENST00000468872 TEP1Q99973 2627 aaKnown RBP3.56□□□□□ -1.84
LSM5-209ENST00000468872 ARHGEF35A5YM69 484 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 FAM231BA6NCW3 169 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 BTBD17A6NE02 478 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 HELTA6NFD8 242 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 OR52A4PA6NMU1 304 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 HIP1O00291 1037 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 HSD17B6O14756 317 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 UGT1A9O60656 530 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 ZNF780AO75290 641 aaPredicted RBP3.56□□□□□ -1.84
LSM5-209ENST00000468872 ZNF19P17023 458 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 OPRD1P41143 372 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 RPL23AP62750 156 aaKnown RBP3.56□□□□□ -1.84
LSM5-209ENST00000468872 CSNK1G2P78368 415 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 ASPHQ12797 758 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 PLD1Q13393 1074 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 OXA1LQ15070 435 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 BOLA3Q53S33 107 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 C11orf71Q6IPW1 123 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 ENPP6Q6UWR7 440 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 GDPD3Q7L5L3 318 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 PRSS41Q7RTY9 318 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 C6orf223Q8N319 242 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 FAM83FQ8NEG4 500 aaPredicted RBP3.56□□□□□ -1.84
LSM5-209ENST00000468872 LINC01006Q8NI28 216 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 UFD1Q92890 307 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 FBXO32Q969P5 355 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 CXorf40BQ96DE9 158 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 TCEANC2Q96MN5 208 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 MRPL45Q9BRJ2 306 aaKnown RBP3.56□□□□□ -1.84
LSM5-209ENST00000468872 THUMPD1Q9NXG2 353 aaKnown RBP3.56□□□□□ -1.84
LSM5-209ENST00000468872 TREM2Q9NZC2 230 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 SEC14L3Q9UDX4 400 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 RABL2BQ9UNT1 228 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 RPL36Q9Y3U8 105 aaKnown RBP3.56□□□□□ -1.84
LSM5-209ENST00000468872 V9GY05 133 aa3.56□□□□□ -1.84
LSM5-209ENST00000468872 THSD7BQ9C0I4 1608 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 NRXN3Q9Y4C0 1643 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 PRUNE2Q8WUY3 3088 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 ADGRL3Q9HAR2 1447 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 IGHV3OR16-13A0A075B7E8 117 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 A0A0J9YXY3 114 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 FAM240BA0A1B0GVZ2 78 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 TRIM64CA6NLI5 447 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 SNAPINO95295 136 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 OXSR1O95747 527 aaPredicted RBP3.55□□□□□ -1.84
LSM5-209ENST00000468872 RFC4P35249 363 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 RBMXP38159 391 aaKnown RBP3.55□□□□□ -1.84
LSM5-209ENST00000468872 APOC4P55056 127 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 OGDHQ02218 1023 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 ZNF763Q0D2J5 394 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 BST1Q10588 318 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 HERPUD1Q15011 391 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 ZNF79Q15937 498 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 EOGTQ5NDL2 527 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 SAMD4BQ5PRF9 694 aaKnown RBP3.55□□□□□ -1.84
LSM5-209ENST00000468872 C1orf146Q5VVC0 180 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 HSDL2Q6YN16 418 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 IL34Q6ZMJ4 242 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 BRSK1Q8TDC3 778 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 DNAJA4Q8WW22 397 aaPredicted RBP3.55□□□□□ -1.84
LSM5-209ENST00000468872 CMTM7Q96FZ5 175 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms