RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 OR1K1Q8NGR3 316 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 ZNF417Q8TAU3 575 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 RNF217Q8TC41 542 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 ADAD1Q96M93 576 aaKnown RBP16.7■□□□□ 0.26
COL7A1-207ENST00000467985 ZNF587Q96SQ5 575 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-207ENST00000467985 KAT8Q9H7Z6 458 aaKnown RBP16.7■□□□□ 0.26
COL7A1-207ENST00000467985 CBLN4Q9NTU7 201 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 JMJD1CQ15652 2540 aa16.7■□□□□ 0.26
COL7A1-207ENST00000467985 HEATR1Q9H583 2144 aaKnown RBP16.69■□□□□ 0.26
COL7A1-207ENST00000467985 IGKV1D-42A0A075B6H8 117 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 SLC22A2O15244 555 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 SLC43A1O75387 559 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 ZNF432O94892 652 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 LGI1O95970 557 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 IGHV4-39P01824 125 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 BMP4P12644 408 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 HOXB1P14653 301 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-207ENST00000467985 GRPRP30550 384 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 CLDN17P56750 224 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 MTPNP58546 118 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 UBE2NP61088 152 aaKnown RBP16.69■□□□□ 0.26
COL7A1-207ENST00000467985 DMTNQ08495 405 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 KLF10Q13118 480 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 TBRG1Q3YBR2 411 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 INTS11Q5TA45 600 aaKnown RBP16.69■□□□□ 0.26
COL7A1-207ENST00000467985 ANKRD16Q6P6B7 361 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 PATL1Q86TB9 770 aaKnown RBP16.69■□□□□ 0.26
COL7A1-207ENST00000467985 KDM8Q8N371 416 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 SCAIQ8N9R8 606 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 MAGEE2Q8TD90 523 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-207ENST00000467985 ALKBH3Q96Q83 286 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-207ENST00000467985 TMEM43Q9BTV4 400 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 PRR14Q9BWN1 585 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 B3GAT1Q9P2W7 334 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 ATP23Q9Y6H3 246 aa16.69■□□□□ 0.26
COL7A1-207ENST00000467985 FN1P02751 2386 aaKnown RBP16.69■□□□□ 0.26
COL7A1-207ENST00000467985 RPL36A-HNRNPH2H7BZ11 118 aa16.68■□□□□ 0.26
COL7A1-207ENST00000467985 NQO1P15559 274 aaKnown RBP16.68■□□□□ 0.26
COL7A1-207ENST00000467985 IL1RL1Q01638 556 aa16.68■□□□□ 0.26
COL7A1-207ENST00000467985 CYLC2Q14093 348 aaPredicted RBP16.68■□□□□ 0.26
COL7A1-207ENST00000467985 ZNF613Q6PF04 617 aa16.68■□□□□ 0.26
COL7A1-207ENST00000467985 SMYD1Q8NB12 490 aa16.68■□□□□ 0.26
COL7A1-207ENST00000467985 BCL2L2Q92843 193 aaPredicted RBP16.68■□□□□ 0.26
COL7A1-207ENST00000467985 SH3GL1Q99961 368 aa16.68■□□□□ 0.26
COL7A1-207ENST00000467985 ASPNQ9BXN1 380 aa16.68■□□□□ 0.26
COL7A1-207ENST00000467985 SEC14L4Q9UDX3 406 aa16.68■□□□□ 0.26
COL7A1-207ENST00000467985 ARPC4-TTLL3A0A0A6YYG9 625 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 M0QX08 132 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 TPST2O60704 377 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 UPK3AO75631 287 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 PCGF2P35227 344 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 ACVR1BP36896 505 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 CDH12P55289 794 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 ROR2Q01974 943 aaKnown RBP16.67■□□□□ 0.26
COL7A1-207ENST00000467985 CHRNB3Q05901 458 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 LGALS3BPQ08380 585 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 SELPLGQ14242 412 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 TRMT5Q32P41 509 aaKnown RBP16.67■□□□□ 0.26
COL7A1-207ENST00000467985 C3orf36Q3SXR2 165 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 MMEL1Q495T6 779 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 C11orf71Q6IPW1 123 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 GPR137CQ8N3F9 429 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 PIK3C3Q8NEB9 887 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 RASSF5Q8WWW0 418 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 SLC41A3Q96GZ6 507 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 SLC38A2Q96QD8 506 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 MCHR1Q99705 422 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 ARHGDIGQ99819 225 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 KCNS3Q9BQ31 491 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 CACNG6Q9BXT2 260 aa16.67■□□□□ 0.26
COL7A1-207ENST00000467985 NPPAP01160 153 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 APOBEC3AP31941 199 aaPredicted RBP16.66■□□□□ 0.26
COL7A1-207ENST00000467985 DUSP7Q16829 419 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 COQ5Q5HYK3 327 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 B3GLCTQ6Y288 498 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 DNM1P46Q6ZS02 220 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 LINGO2Q7L985 606 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 SNX32Q86XE0 403 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 UEVLDQ8IX04 471 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 FAM169BQ8N8A8 192 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 OR10A6Q8NH74 314 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 SLC26A7Q8TE54 656 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 OR2M2Q96R28 347 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 KATNB1Q9BVA0 655 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 REG4Q9BYZ8 158 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 MYLK2Q9H1R3 596 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 MRPL39Q9NYK5 338 aaKnown RBP16.66■□□□□ 0.26
COL7A1-207ENST00000467985 NOX1Q9Y5S8 564 aa16.66■□□□□ 0.26
COL7A1-207ENST00000467985 RNF223E7ERA6 249 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 ATP6V1G2-DDX39BF2Z307 99 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 MS4A18H0YCH9 400 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 H7C417 338 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 M0R3H8 397 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 TRAF3IP2O43734 574 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-207ENST00000467985 CHP2O43745 196 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 MT-ATP6P00846 226 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 CRYAAP02489 173 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 BGLAPP02818 100 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 PTNP21246 168 aa16.65■□□□□ 0.26
COL7A1-207ENST00000467985 DSCR9P59020 149 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms