RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, human

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSSC4-208	ENST00000467308	CENPVL1	A0A0U1RR11	272 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	SERINC4	A6NH21	518 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	EFNA2	O43921	213 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	PRSS23	O95084	383 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	IFNW1	P05000	195 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	FABP3	P05413	133 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	THBS2	P35442	1172 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	OR3A2	P47893	321 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	NUDT6	P53370	316 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	CDH11	P55287	796 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	VLDLR	P98155	873 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	LOXL1	Q08397	574 aa	Predicted RBP	13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	PPA1	Q15181	289 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	CD226	Q15762	336 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	ATP6AP1	Q15904	470 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	TIMM23B	Q5SRD1	257 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	PDZK1	Q5T2W1	519 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	ZNF836	Q6ZNA1	936 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	P2RY8	Q86VZ1	359 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	ZDHHC21	Q8IVQ6	265 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	PQLC1	Q8N2U9	271 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	FAM71C	Q8NEG0	241 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	MUCL1	Q96DR8	90 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	ZNF347	Q96SE7	839 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	POLR2J2	Q9GZM3	115 aa	Known RBP	13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	POLR2J3	Q9H1A7	115 aa	Known RBP	13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	NDUFAF4	Q9P032	175 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	KLHL9	Q9P2J3	617 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	LPAR3	Q9UBY5	353 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	SLC13A4	Q9UKG4	626 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	ENPP4	Q9Y6X5	453 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	SVEP1	Q4LDE5	3571 aa		13.87	□□□□□ -0.19
TSSC4-208	ENST00000467308	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	FMO6P	O60774	539 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	DEAF1	O75398	565 aa	Predicted RBP	13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	FAS	P25445	335 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	SUMO3	P55854	103 aa	Predicted RBP	13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	RAC3	P60763	192 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	ZNF117	Q03924	483 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	GK3P	Q14409	553 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	ELOA3B	Q3SY89	546 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	GLIPR1L2	Q4G1C9	344 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	MRPL2	Q5T653	305 aa	Known RBP	13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	CLEC2A	Q6UVW9	174 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	TSEN54	Q7Z6J9	526 aa	Known RBP	13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	COMTD1	Q86VU5	262 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	CARM1	Q86X55	608 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	ZNF440	Q8IYI8	595 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	CLIP4	Q8N3C7	705 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	ELOA3	Q8NG57	546 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	BEX2	Q9BXY8	128 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	COQ10B	Q9H8M1	238 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	EXOSC3	Q9NQT5	275 aa	Known RBP	13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	DNAJB9	Q9UBS3	223 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	RIMS3	Q9UJD0	308 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	ING1	Q9UK53	422 aa	Predicted RBP	13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	SH3GLB1	Q9Y371	365 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308		V9GYQ6	96 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	ANK2	Q01484	3957 aa		13.86	□□□□□ -0.19
TSSC4-208	ENST00000467308	NPIPA5	A0A0B4J1W7	369 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	NPIPA7	E9PJI5	369 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308		H3BNH8	94 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	ABCD4	O14678	606 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	LYZL6	O75951	148 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	NPIPA8	P0DM63	369 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	RHCE	P18577	417 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	COX5A	P20674	150 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	ENPP1	P22413	925 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	SLC34A1	Q06495	639 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	STK11	Q15831	433 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	C11orf71	Q6IPW1	123 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	CENPN	Q96H22	339 aa	Predicted RBP	13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	ZNF300	Q96RE9	604 aa	Predicted RBP	13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	KCNK17	Q96T54	332 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	PSD2	Q9BQI7	771 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	CACNG6	Q9BXT2	260 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	AMBRA1	Q9C0C7	1298 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	ICAM5	Q9UMF0	924 aa		13.85	□□□□□ -0.19
TSSC4-208	ENST00000467308	MALRD1	Q5VYJ5	2156 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	CASQ2	O14958	399 aa	Predicted RBP	13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	TIPRL	O75663	272 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	NUDT14	O95848	222 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	SLC25A16	P16260	332 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	TTK	P33981	857 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	OR1E2	P47887	323 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	P2RX1	P51575	399 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	PLAUR	Q03405	335 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	SELENBP1	Q13228	472 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	KRTAP24-1	Q3LI83	254 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	OR2T5	Q6IEZ7	315 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	CBLN3	Q6UW01	205 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	TOR1AIP2	Q8NFQ8	470 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	OR4D11	Q8NGI4	311 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	OR2T29	Q8NH02	315 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	PHOSPHO1	Q8TCT1	267 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	LRTOMT	Q8WZ04	291 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	MRGPRX4	Q96LA9	322 aa		13.84	□□□□□ -0.19
TSSC4-208	ENST00000467308	DHRS1	Q96LJ7	313 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms