RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 HS3ST3B1Q9Y662 390 aa16.54■□□□□ 0.24
COL9A3-205ENST00000466192 PMS2P1A4D2B8 440 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 ANKUB1A6NFN9 424 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 NCR1O76036 304 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 COX6A1P12074 109 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 APEHP13798 732 aaKnown RBP16.53■□□□□ 0.24
COL9A3-205ENST00000466192 TMED10P49755 219 aaKnown RBP16.53■□□□□ 0.24
COL9A3-205ENST00000466192 CLDN6P56747 220 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 SLC3A1Q07837 685 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 LGALS3BPQ08380 585 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 OR2Y1Q8NGV0 311 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 OR5J2Q8NH18 312 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 IMMP1LQ96LU5 166 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 RASL10BQ96S79 203 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 ZNF700Q9H0M5 742 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 MED11Q9P086 117 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 FAM171A2A8MVW0 826 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 RGS9O75916 674 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-205ENST00000466192 DKK1O94907 266 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 HIST1H2ABP04908 130 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 FBXO45P0C2W1 286 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 PYCR1P32322 319 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 GGTLC2Q14390 218 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 ZMAT1Q5H9K5 638 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 DCAF12Q5T6F0 453 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 LYPD4Q6UWN0 246 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 HIST3H2AQ7L7L0 130 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 POMGNT2Q8NAT1 580 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 LSM14AQ8ND56 463 aaKnown RBP16.53■□□□□ 0.24
COL9A3-205ENST00000466192 SLC22A8Q8TCC7 542 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 HIST1H2ACQ93077 130 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 MIXL1Q9H2W2 232 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 RPRD1BQ9NQG5 326 aaKnown RBP16.53■□□□□ 0.24
COL9A3-205ENST00000466192 KLRF1Q9NZS2 232 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 AKAP7Q9P0M2 348 aaPredicted RBP16.53■□□□□ 0.24
COL9A3-205ENST00000466192 POLHQ9Y253 713 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 SLC6A5Q9Y345 797 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 GRIP1Q9Y3R0 1128 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 V9GYH0 126 aa16.53■□□□□ 0.24
COL9A3-205ENST00000466192 A8MVM7 634 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 SELENOFO60613 162 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 SNX4O95219 450 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 OR2T7P0C7T2 308 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 PRKCAP17252 672 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 SDHAP31040 664 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 ACVR1BP36896 505 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 PTGDSP41222 190 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 DIO1P49895 249 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 TP53I3Q53FA7 332 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 LCN1P1Q5VSP4 162 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 JAZF1Q86VZ6 243 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 SLC35F2Q8IXU6 374 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 OR2T27Q8NH04 317 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 AP3S1Q92572 193 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 RELTQ969Z4 430 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 SLC25A36Q96CQ1 311 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 WDFY2Q96P53 400 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 TSSK2Q96PF2 358 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 OR11A1Q9GZK7 315 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 TAS2R5Q9NYW4 299 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 NOX1Q9Y5S8 564 aa16.52■□□□□ 0.24
COL9A3-205ENST00000466192 PLPP2O43688 288 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 STK17BO94768 372 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 TXNDC12O95881 172 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 DDI2Q5TDH0 399 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 C1orf140Q5VVS0 124 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 ARSKQ6UWY0 536 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 NAXDQ8IW45 347 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 SCAIQ8N9R8 606 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 TMEM234Q8WY98 164 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 HTRA1Q92743 480 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 TSPAN32Q96QS1 320 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 KCNN2Q9H2S1 579 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 CCDC86Q9H6F5 360 aaKnown RBP16.51■□□□□ 0.23
COL9A3-205ENST00000466192 CACNA1HO95180 2353 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 SLC35F4A4IF30 521 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 GALP22466 123 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 INSM1Q01101 510 aaPredicted RBP16.51■□□□□ 0.23
COL9A3-205ENST00000466192 NTRK2Q16620 822 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 FAM69AQ5T7M9 428 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 MAMDC2Q7Z304 686 aaPredicted RBP16.51■□□□□ 0.23
COL9A3-205ENST00000466192 OR8H2Q8N162 312 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 ST8SIA1Q92185 356 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 SPACA9Q96E40 222 aaPredicted RBP16.51■□□□□ 0.23
COL9A3-205ENST00000466192 PPIL3Q9H2H8 161 aaKnown RBP16.51■□□□□ 0.23
COL9A3-205ENST00000466192 COMMD3Q9UBI1 195 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 GRHPRQ9UBQ7 328 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 ZNF346Q9UL40 294 aaKnown RBP16.51■□□□□ 0.23
COL9A3-205ENST00000466192 SDK2Q58EX2 2172 aa16.51■□□□□ 0.23
COL9A3-205ENST00000466192 FREM2Q5SZK8 3169 aa16.5■□□□□ 0.23
COL9A3-205ENST00000466192 MT-ATP6P00846 226 aa16.5■□□□□ 0.23
COL9A3-205ENST00000466192 AZGP1P25311 298 aaKnown RBP16.5■□□□□ 0.23
COL9A3-205ENST00000466192 HTR3AP46098 478 aa16.5■□□□□ 0.23
COL9A3-205ENST00000466192 SUMO3P55854 103 aaPredicted RBP16.5■□□□□ 0.23
COL9A3-205ENST00000466192 TAS2R43P59537 309 aa16.5■□□□□ 0.23
COL9A3-205ENST00000466192 ZNF79Q15937 498 aa16.5■□□□□ 0.23
COL9A3-205ENST00000466192 MESTQ5EB52 335 aa16.5■□□□□ 0.23
COL9A3-205ENST00000466192 SLC35D3Q5M8T2 416 aa16.5■□□□□ 0.23
COL9A3-205ENST00000466192 RAB11FIP2Q7L804 512 aa16.5■□□□□ 0.23
COL9A3-205ENST00000466192 EXD3Q8N9H8 876 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms