RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 C1orf185Q5T7R7 199 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 ZNF585AQ6P3V2 769 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 SMARCD3Q6STE5 483 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 GALNT5Q7Z7M9 940 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 WDFY1Q8IWB7 410 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 KDM8Q8N371 416 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 RPRMLQ8N4K4 120 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 C9orf106Q8NAJ2 232 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 GALNT11Q8NCW6 608 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 MBD3L2Q8NHZ7 208 aaPredicted RBP9.93□□□□□ -0.82
VCP-204ENST00000466100 MAGEE2Q8TD90 523 aaPredicted RBP9.93□□□□□ -0.82
VCP-204ENST00000466100 ABHD3Q8WU67 409 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 WNT2BQ93097 391 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 SAMD8Q96LT4 415 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 TRIB1Q96RU8 372 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 TP63Q9H3D4 680 aaPredicted RBP9.93□□□□□ -0.82
VCP-204ENST00000466100 RNF122Q9H9V4 155 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 ZNF556Q9HAH1 456 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 KLHL13Q9P2N7 655 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 TINAGQ9UJW2 476 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 RASD1Q9Y272 281 aa9.93□□□□□ -0.82
VCP-204ENST00000466100 HELZ2Q9BYK8 2649 aaKnown RBP9.93□□□□□ -0.82
VCP-204ENST00000466100 C11orf98E9PRG8 122 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 BLOC1S5-TXNDC5H3BN57 136 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 BHLHE40O14503 412 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 VAMP5O95183 116 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 RCBTB2O95199 551 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 SNAP29O95721 258 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 HIST1H2ABP04908 130 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 F13BP05160 661 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 STSP08842 583 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 FCGR2AP12318 317 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 CA7P43166 264 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 PRPS1P60891 318 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 ESRRGP62508 458 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 MRPL49Q13405 166 aaKnown RBP9.92□□□□□ -0.82
VCP-204ENST00000466100 RFX4Q33E94 735 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 ALG10Q5BKT4 473 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 RPL13AP3Q6NVV1 102 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 HIST3H2AQ7L7L0 130 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 CHMP1BQ7LBR1 199 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 FAM122BQ7Z309 247 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 PXKQ7Z7A4 578 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 IGFN1Q86VF2 1251 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 SLC43A2Q8N370 569 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 GALNT4Q8N4A0 578 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 MARVELD2Q8N4S9 558 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 ZIC4Q8N9L1 334 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 OR9K2Q8NGE7 335 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 OR4Q3Q8NH05 313 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 HIST1H2ACQ93077 130 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 RDH12Q96NR8 316 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 OXGR1Q96P68 337 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 MBOAT4Q96T53 435 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 SF3B5Q9BWJ5 86 aaKnown RBP9.92□□□□□ -0.82
VCP-204ENST00000466100 BCO1Q9HAY6 547 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 NRIP3Q9NQ35 241 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 INIPQ9NRY2 104 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 IL20RAQ9UHF4 553 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 NOX1Q9Y5S8 564 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 FLVCR1Q9Y5Y0 555 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 COL12A1Q99715 3063 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 LRRK2Q5S007 2527 aa9.92□□□□□ -0.82
VCP-204ENST00000466100 DOPEY1Q5JWR5 2465 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 SPTBN1Q01082 2364 aaKnown RBP9.91□□□□□ -0.82
VCP-204ENST00000466100 ZAR1LA6NP61 321 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 ZNF724A8MTY0 619 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 RNF13O43567 381 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 SS18L1O75177 396 aaPredicted RBP9.91□□□□□ -0.82
VCP-204ENST00000466100 TOXO94900 526 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 CD14P08571 375 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 GLI4P10075 376 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 APEHP13798 732 aaKnown RBP9.91□□□□□ -0.82
VCP-204ENST00000466100 CEACAM8P31997 349 aaPredicted RBP9.91□□□□□ -0.82
VCP-204ENST00000466100 NTF4P34130 210 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 POLR2IP36954 125 aaKnown RBP9.91□□□□□ -0.82
VCP-204ENST00000466100 CRISP1P54107 249 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 RAD23AP54725 363 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 CDK5Q00535 292 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 POU3F1Q03052 451 aaPredicted RBP9.91□□□□□ -0.82
VCP-204ENST00000466100 RASGEF1BQ0VAM2 473 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 NPRL3Q12980 569 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 RNPS1Q15287 305 aaKnown RBP9.91□□□□□ -0.82
VCP-204ENST00000466100 SF3B4Q15427 424 aaKnown RBP eCLIP9.91□□□□□ -0.82
VCP-204ENST00000466100 B3GNT6Q6ZMB0 384 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 C3P1Q6ZMU1 363 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 DPY19L2P2Q6ZN68 376 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 CREB3L2Q70SY1 520 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 LNX2Q8N448 690 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 ANKK1Q8NFD2 765 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 ZNF519Q8TB69 540 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 TSPAN32Q96QS1 320 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 DMRTA2Q96SC8 542 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 TTYH2Q9BSA4 534 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 KATNB1Q9BVA0 655 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 GRIP2Q9C0E4 1043 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 RASSF4Q9H2L5 321 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 TOR3AQ9H497 397 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 SLC25A19Q9HC21 320 aa9.91□□□□□ -0.82
VCP-204ENST00000466100 GP6Q9HCN6 339 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms