RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ITGA5P08648 1049 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 ASAH2BP0C7U1 165 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 RHCEP18577 417 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 CDH2P19022 906 aaPredicted RBP10.28□□□□□ -0.76
CUX1-207ENST00000465461 PSMB1P20618 241 aaKnown RBP10.28□□□□□ -0.76
CUX1-207ENST00000465461 IL32P24001 234 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 AQP2P41181 271 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 PUDPQ08623 228 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 ITGADQ13349 1161 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 MELKQ14680 651 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 MFSD13AQ14CX5 517 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 LAPTM4AQ15012 233 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 SEC23BQ15437 767 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 STK11Q15831 433 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 FGD3Q5JSP0 725 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 PHYHD1Q5SRE7 291 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 LCN8Q6JVE9 175 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 PODNL1Q6PEZ8 512 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 NHLRC1Q6VVB1 395 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 ZNF730Q6ZMV8 503 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 HIST3H2AQ7L7L0 130 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 BHLHA15Q7RTS1 189 aaPredicted RBP10.28□□□□□ -0.76
CUX1-207ENST00000465461 TMEM200AQ86VY9 491 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 WFDC8Q8IUA0 241 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 ARHGAP24Q8N264 748 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 ZNF433Q8N7K0 673 aaPredicted RBP10.28□□□□□ -0.76
CUX1-207ENST00000465461 SCAIQ8N9R8 606 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 ADPRHL1Q8NDY3 354 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 MOSPD2Q8NHP6 518 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 NRGNQ92686 78 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 HIST1H2ACQ93077 130 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 KISS1RQ969F8 398 aaPredicted RBP10.28□□□□□ -0.76
CUX1-207ENST00000465461 BPIFA2Q96DR5 249 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 C14orf79Q96F83 325 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 HS6ST2Q96MM7 605 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 DACH2Q96NX9 599 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 PIP5K1AQ99755 562 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 CADM1Q9BY67 442 aaKnown RBP10.28□□□□□ -0.76
CUX1-207ENST00000465461 SLCO5A1Q9H2Y9 848 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 PARPBPQ9NWS1 579 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 ASB6Q9NWX5 421 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 ZNF229Q9UJW7 825 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 GPR52Q9Y2T5 361 aa10.28□□□□□ -0.76
CUX1-207ENST00000465461 SLC35F4A4IF30 521 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 A6NNC1 897 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 CASKO14936 926 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 CTAG2O75638 210 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 DNAJC8O75937 253 aaPredicted RBP10.27□□□□□ -0.77
CUX1-207ENST00000465461 KRT33AO76009 404 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 ZNF432O94892 652 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 FABP3P05413 133 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 IFNGR1P15260 489 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 SSTR2P30874 369 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 PEX19P40855 299 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 GPR4P46093 362 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 SPIBQ01892 262 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 PRKCDQ05655 676 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 RPL18Q07020 188 aaKnown RBP10.27□□□□□ -0.77
CUX1-207ENST00000465461 PPP1R8Q12972 351 aaKnown RBP10.27□□□□□ -0.77
CUX1-207ENST00000465461 P2RY6Q15077 328 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 DNAL1Q4LDG9 190 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 PGM2L1Q6PCE3 622 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 NANOGNBQ7Z5D8 188 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 IGFN1Q86VF2 1251 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 ZDHHC21Q8IVQ6 265 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 OR51A7Q8NH64 312 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 SLC7A13Q8TCU3 470 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 ACOT11Q8WXI4 607 aaPredicted RBP10.27□□□□□ -0.77
CUX1-207ENST00000465461 MCUR1Q96AQ8 359 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 ASB9Q96DX5 294 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 ALKBH3Q96Q83 286 aaPredicted RBP10.27□□□□□ -0.77
CUX1-207ENST00000465461 OR2M2Q96R28 347 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 MCCC2Q9HCC0 563 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 IL1RAPQ9NPH3 570 aa10.27□□□□□ -0.77
CUX1-207ENST00000465461 TRAV27A0A087WT01 109 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 NBPF19A0A087WUL8 3843 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 LOC102725191A0A1B0GVB3 256 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 A0A1W2PPR1 153 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 CIB4A0PJX0 185 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 M0R3G1 203 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 PDLIM1O00151 329 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 CDC42EP2O14613 210 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 SAGP10523 405 aaPredicted RBP10.26□□□□□ -0.77
CUX1-207ENST00000465461 ITGA2P17301 1181 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 COX5AP20674 150 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 RRM2P31350 389 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 PCYT1AP49585 367 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 BIDP55957 195 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 ZP4Q12836 540 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 CAMK2DQ13557 499 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 DAZAP2Q15038 168 aaPredicted RBP10.26□□□□□ -0.77
CUX1-207ENST00000465461 TAB1Q15750 504 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 FBXW10Q5XX13 1052 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 MBOAT2Q6ZWT7 520 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 SLC35D2Q76EJ3 337 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 PXKQ7Z7A4 578 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 STEAP2Q8NFT2 490 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 OR13C2Q8NGS9 318 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 OR52N5Q8NH56 324 aa10.26□□□□□ -0.77
CUX1-207ENST00000465461 ZNF837Q96EG3 531 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms