RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 GPM6AP51674 278 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF133P52736 654 aaPredicted RBP1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ERVK-25P63136 954 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 SCRN3Q0VDG4 424 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 BST1Q10588 318 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 PLD1Q13393 1074 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ARFRP1Q13795 201 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 KIAA0087Q14695 138 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 BOLA3Q53S33 107 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 CTSL3PQ5NE16 218 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 VAX1Q5SQQ9 334 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 GPR157Q5UAW9 335 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 FRMPD2BQ6IN97 320 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 PMF1Q6P1K2 205 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 Q6P435 159 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 UQCC3Q6UW78 93 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF621Q6ZSS3 439 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF571Q7Z3V5 609 aaPredicted RBP1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF546Q86UE3 836 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ECHDC2Q86YB7 292 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 NUDCD3Q8IVD9 361 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 CCDC65Q8IXS2 484 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 KIR2DL5AQ8N109 375 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 SLC34A3Q8N130 599 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 FAM71E2Q8N5Q1 922 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF433Q8N7K0 673 aaPredicted RBP1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 TPRX1Q8N7U7 411 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 MDS2Q8NDY4 140 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 OR2L3Q8NG85 312 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 OR4F6Q8NGB9 312 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 OR13C2Q8NGS9 318 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 OR6X1Q8NH79 312 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 KIR2DL5BQ8NHK3 375 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 PYROXD1Q8WU10 500 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 RDH5Q92781 318 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 TUBGCP3Q96CW5 907 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 FAM210BQ96KR6 192 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 C12orf42Q96LP6 360 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF285Q96NJ3 590 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 MS4A4EQ96PG1 132 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 RASL11BQ9BPW5 248 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ROPN1BQ9BZX4 212 aaPredicted RBP1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 ACTR6Q9GZN1 396 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 MFFQ9GZY8 342 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 PPA2Q9H2U2 334 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 SRMSQ9H3Y6 488 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 RNF167Q9H6Y7 350 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 PLGRKTQ9HBL7 147 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 NMRAL1Q9HBL8 299 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 DMAP1Q9NPF5 467 aaPredicted RBP1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 GLRX2Q9NS18 164 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 CALYQ9NYX4 217 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 TMCO1Q9UM00 188 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 NEU3Q9UQ49 428 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 KCNIP3Q9Y2W7 256 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 GTF3C1Q12789 2109 aa1.21□□□□□ -2.22
NUCKS1-202ENST00000464938 PPIAL4EA0A075B759 164 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 IGKV1D-13A0A0B4J2D9 117 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 FAM166BA8MTA8 275 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 TRIM49D1C9J1S8 452 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 HAS3O00219 553 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PEX7O00628 323 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 TMEM50AO95807 157 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 NDUFB10O96000 172 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 P04436 131 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PCCAP05165 728 aaPredicted RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 CRYGBP07316 175 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 HOXC4P09017 264 aaPredicted RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PPIAL4FP0DN26 164 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 IGHV3-43DP0DP04 118 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 IGKV1-13P0DP09 117 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 RPS2P15880 293 aaKnown RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 FMO3P31513 532 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 EPS15P42566 896 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 RPS10P46783 165 aaKnown RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 GYG1P46976 350 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 GSSP48637 474 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 CSNK1DP48730 415 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 FGF8P55075 233 aaPredicted RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 FBXW4P57775 412 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PLP1P60201 277 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PDIA2Q13087 525 aaKnown RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 UNC119Q13432 240 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 DDX39BQ13838 428 aaKnown RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 FZD2Q14332 565 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 CYTH1Q15438 398 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 RSPO1Q2MKA7 263 aaPredicted RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 MAJINQ3KP22 176 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 KCTD21Q4G0X4 260 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF658BQ4V348 819 aaPredicted RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PAGE3Q5JUK9 113 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PHYHD1Q5SRE7 291 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 C6orf89Q6UWU4 347 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 LYPD2Q6UXB3 125 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 Q6ZN92 141 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 Q6ZVH6 145 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 RUFY3Q7L099 469 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF429Q86V71 674 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 CDR2LQ86X02 465 aaPredicted RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms