RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 NPAS2Q99743 824 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 RIOK1Q9BRS2 568 aaKnown RBP3.69□□□□□ -1.82
PTCD3-205ENST00000464541 KLHL28Q9NXS3 571 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 KIF25Q9UIL4 384 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 PHF11Q9UIL8 331 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 WSB1Q9Y6I7 421 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 LTBP1Q14766 1721 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 SH3TC1Q8TE82 1336 aa3.69□□□□□ -1.82
PTCD3-205ENST00000464541 LOC100506127A0A0U1RQW1 187 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 ARHGEF35A5YM69 484 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 K7ERQ8 282 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 UFL1O94874 794 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 KLF8O95600 359 aaPredicted RBP3.68□□□□□ -1.82
PTCD3-205ENST00000464541 RCC1P18754 421 aaPredicted RBP3.68□□□□□ -1.82
PTCD3-205ENST00000464541 ANXA13P27216 316 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 HTR1FP30939 366 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 HPCAL1P37235 193 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 CDKN1BP46527 198 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 CDH4P55283 916 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 LRRC63Q05C16 580 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 MESDQ14696 234 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 KLHL40Q2TBA0 621 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 Q3ZCU0 254 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 TFDP3Q5H9I0 405 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 PIP5KL1Q5T9C9 394 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 ATL3Q6DD88 541 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 EIF3MQ7L2H7 374 aaKnown RBP3.68□□□□□ -1.82
PTCD3-205ENST00000464541 KIAA1328Q86T90 577 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 MOB3BQ86TA1 216 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 ACOT1Q86TX2 421 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 SYCE1Q8N0S2 351 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 MDS2Q8NDY4 140 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 EFHD2Q96C19 240 aaPredicted RBP3.68□□□□□ -1.82
PTCD3-205ENST00000464541 RPRD1AQ96P16 312 aaPredicted RBP3.68□□□□□ -1.82
PTCD3-205ENST00000464541 ZNF670Q9BS34 389 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 NIPSNAP3BQ9BS92 247 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 NXF5Q9H1B4 397 aaKnown RBP3.68□□□□□ -1.82
PTCD3-205ENST00000464541 AUNIPQ9H7T9 357 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 AGPAT3Q9NRZ7 376 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 SLC2A8Q9NY64 477 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 CHMP5Q9NZZ3 219 aa3.68□□□□□ -1.82
PTCD3-205ENST00000464541 MTRF1LQ9UGC7 380 aaKnown RBP3.68□□□□□ -1.82
PTCD3-205ENST00000464541 NUFIP1Q9UHK0 495 aaKnown RBP3.68□□□□□ -1.82
PTCD3-205ENST00000464541 FAM166BA8MTA8 275 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 SUPT3HB4E1H0 165 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 KRTAP4-16G5E9R7 235 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-205ENST00000464541 ARPC3O15145 178 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 RS1O15537 224 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 RNF13O43567 381 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 OR1F1O43749 312 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 FCMRO60667 390 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 TPST2O60704 377 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 CSTAP01040 98 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 LGALS2P05162 132 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 OR8G3PP0DMU2 310 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 CPN2P22792 545 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 PPOXP50336 477 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 DAP3P51398 398 aaKnown RBP3.67□□□□□ -1.82
PTCD3-205ENST00000464541 PRPS1P60891 318 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 CNTN2Q02246 1040 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 STK38Q15208 465 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 TRIM16LQ309B1 348 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 NKAIN1Q4KMZ8 207 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 HSP90AA4PQ58FG1 418 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 PAGE3Q5JUK9 113 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 C10orf120Q5SQS8 335 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 LIN9Q5TKA1 542 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 RAET1LQ5VY80 246 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 PDPK2PQ6A1A2 396 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 ZSCAN25Q6NSZ9 544 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 KDM7AQ6ZMT4 941 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 LUZP2Q86TE4 346 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 ZNF429Q86V71 674 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 KATNAL2Q8IYT4 538 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 SYT14Q8NB59 555 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 MITD1Q8WV92 249 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 ST8SIA1Q92185 356 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 FAM3CQ92520 227 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 PIGCQ92535 297 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 OSTF1Q92882 214 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 SH3YL1Q96HL8 342 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-205ENST00000464541 ARL5BQ96KC2 179 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 NPY6RQ99463 290 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 RIT2Q99578 217 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 OMDQ99983 421 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 TUBGCP2Q9BSJ2 902 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 SPATA16Q9BXB7 569 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 DNTTIP1Q9H147 329 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 TDRD3Q9H7E2 651 aaKnown RBP3.67□□□□□ -1.82
PTCD3-205ENST00000464541 MRPL22Q9NWU5 206 aaKnown RBP3.67□□□□□ -1.82
PTCD3-205ENST00000464541 UBAP1Q9NZ09 502 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 PEF1Q9UBV8 284 aaKnown RBP3.67□□□□□ -1.82
PTCD3-205ENST00000464541 CDH9Q9ULB4 789 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 PIGLQ9Y2B2 252 aa3.67□□□□□ -1.82
PTCD3-205ENST00000464541 TRAV26-1A0A087WT03 109 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 ERICH2A1L162 156 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 OR6C74A6NCV1 312 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 TRDMT1O14717 391 aaKnown RBP3.66□□□□□ -1.82
PTCD3-205ENST00000464541 CXCL13O43927 109 aa3.66□□□□□ -1.82
PTCD3-205ENST00000464541 FAM189A1O60320 539 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms