RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 SNRPD2P62316 118 aaKnown RBP12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 NAAAQ02083 359 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 C1DQ13901 141 aaKnown RBP12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 SCARB2Q14108 478 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 SQLEQ14534 574 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 EFNB3Q15768 340 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 ADRM1Q16186 407 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 C6orf52Q5T4I8 152 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 CXXC5Q7LFL8 322 aaKnown RBP12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 COMTD1Q86VU5 262 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 C10orf111Q8N326 155 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 GPR137CQ8N3F9 429 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 PIK3C3Q8NEB9 887 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 OR4F15Q8NGB8 312 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 ZNF417Q8TAU3 575 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 HTRA1Q92743 480 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 SLC41A3Q96GZ6 507 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 ATP6V1G3Q96LB4 118 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 ZNF587Q96SQ5 575 aaPredicted RBP12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 EPYCQ99645 322 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 RABEP2Q9H5N1 569 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 TMEM27Q9HBJ8 222 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 GPR35Q9HC97 309 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 CA10Q9NS85 328 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 TMEM160Q9NX00 188 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 SELENONQ9NZV5 590 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 KLHL14Q9P2G3 628 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 SEC14L4Q9UDX3 406 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 FKBP7Q9Y680 259 aa12.5□□□□□ -0.41
SNRNP40-203ENST00000463988 A0A096LPE4 126 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 A0A1W2PPZ6 126 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 B9A039 149 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 NDUFS8O00217 210 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 CECR9P0C854 216 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 CBR1P16152 277 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 USF1P22415 310 aaPredicted RBP12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 GRPRP30550 384 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 NCALDP61601 193 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 ARF1P84077 181 aaKnown RBP12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 CHRFAM7AQ494W8 412 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 AGKQ53H12 422 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 SWT1Q5T5J6 900 aaKnown RBP12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 PODNL1Q6PEZ8 512 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 DLEU7Q6UYE1 221 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 TMEM123Q8N131 208 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 SCAIQ8N9R8 606 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 HIPK4Q8NE63 616 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 NUP37Q8NFH4 326 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 NANOS1Q8WY41 292 aaKnown RBP12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 LRR1Q96L50 414 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 OR2M2Q96R28 347 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 IKZF5Q9H5V7 419 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 MYOZ1Q9NP98 299 aaPredicted RBP12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 SLC13A4Q9UKG4 626 aa12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 YLPM1P49750 1951 aaKnown RBP12.49□□□□□ -0.41
SNRNP40-203ENST00000463988 A0A0B4J2E0 115 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 A0A1B0GX12 115 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 VSTM5A8MXK1 200 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 MS4A18H0YCH9 400 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 TRAF3IP2O43734 574 aaPredicted RBP12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 FMO6PO60774 539 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 ARR3P36575 388 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 PDLIM4P50479 330 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 RGS8P57771 180 aaPredicted RBP12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 OR1Q1Q15612 314 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 ADIPOQQ15848 244 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 MS4A18Q3C1V0 323 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 GLIPR1L2Q4G1C9 344 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 RUNDC3AQ59EK9 446 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 CYB5R2Q6BCY4 276 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 RANBP3LQ86VV4 465 aaPredicted RBP12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 ARMC8Q8IUR7 673 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 UEVLDQ8IX04 471 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 IL17RDQ8NFM7 739 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 CPPED1Q9BRF8 314 aaPredicted RBP12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 TMEM43Q9BTV4 400 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 PRR14Q9BWN1 585 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 PLK3Q9H4B4 646 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 CDC42EP3Q9UKI2 254 aa12.48□□□□□ -0.41
SNRNP40-203ENST00000463988 ZNF99A8MXY4 864 aaPredicted RBP12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 VWC2LB2RUY7 222 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 TPST2O60704 377 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 MFN2O95140 757 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 BGLAPP02818 100 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 OR4A8P0C604 315 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 NQO1P15559 274 aaKnown RBP12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 CALCRP30988 508 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 PPOXP50336 477 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 PCBP3P57721 371 aaKnown RBP12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 TUBA1BP68363 451 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 TUBA4AP68366 448 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 RBBP4Q09028 425 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 CEACAM16Q2WEN9 425 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 NHLRC1Q6VVB1 395 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 TUBA1AQ71U36 451 aa12.47□□□□□ -0.41
SNRNP40-203ENST00000463988 ZNF627Q7L945 461 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms