RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 TMPRSS11FQ6ZWK6 438 aa16.76■□□□□ 0.27
LMNB1-204ENST00000463908 YTHDF3Q7Z739 585 aaKnown RBP16.76■□□□□ 0.27
LMNB1-204ENST00000463908 WDFY1Q8IWB7 410 aa16.76■□□□□ 0.27
LMNB1-204ENST00000463908 PAPD5Q8NDF8 572 aaKnown RBP16.76■□□□□ 0.27
LMNB1-204ENST00000463908 OR4K5Q8NGD3 323 aa16.76■□□□□ 0.27
LMNB1-204ENST00000463908 TXNDC15Q96J42 360 aa16.76■□□□□ 0.27
LMNB1-204ENST00000463908 ALPK1Q96QP1 1244 aa16.76■□□□□ 0.27
LMNB1-204ENST00000463908 CCM2LQ9NUG4 571 aaPredicted RBP16.76■□□□□ 0.27
LMNB1-204ENST00000463908 VNN3Q9NY84 501 aa16.76■□□□□ 0.27
LMNB1-204ENST00000463908 HCFC1P51610 2035 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 BLOC1S5-TXNDC5H3BN57 136 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 CDC42EP2O14613 210 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 TRAF3IP2O43734 574 aaPredicted RBP16.75■□□□□ 0.27
LMNB1-204ENST00000463908 KRT36O76013 467 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 ZNF432O94892 652 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 HIST1H2ABP04908 130 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 ZNF43P17038 809 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 AHCYP23526 432 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 PUDPQ08623 228 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 PPP1R8Q12972 351 aaKnown RBP16.75■□□□□ 0.27
LMNB1-204ENST00000463908 EXOC3L2Q2M3D2 409 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 C1orf146Q5VVC0 180 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 OR2T5Q6IEZ7 315 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 HIST3H2AQ7L7L0 130 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 AAED1Q7RTV5 226 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 PXKQ7Z7A4 578 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 ZER1Q7Z7L7 766 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 ZNF100Q8IYN0 542 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 GABRG1Q8N1C3 465 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 OR4C15Q8NGM1 316 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 OR2T29Q8NH02 315 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 MOSPD2Q8NHP6 518 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 HIST1H2ACQ93077 130 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 GPA33Q99795 319 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 PARPBPQ9NWS1 579 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 ELOVL5Q9NYP7 299 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 FOXD3Q9UJU5 478 aaPredicted RBP16.75■□□□□ 0.27
LMNB1-204ENST00000463908 LYVE1Q9Y5Y7 322 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 CREBBPQ92793 2442 aa16.75■□□□□ 0.27
LMNB1-204ENST00000463908 EFCAB9A8MZ26 197 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 C11orf98E9PRG8 122 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 IGHV3-9P01782 118 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 CD79BP40259 229 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 AQP2P41181 271 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 GPR4P46093 362 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 PCYT1AP49585 367 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 SELENOPP49908 381 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 CLDN17P56750 224 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 GABPB1Q06547 395 aaPredicted RBP16.74■□□□□ 0.27
LMNB1-204ENST00000463908 RPL18Q07020 188 aaKnown RBP16.74■□□□□ 0.27
LMNB1-204ENST00000463908 C1DQ13901 141 aaKnown RBP16.74■□□□□ 0.27
LMNB1-204ENST00000463908 TSPO2Q5TGU0 170 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 BEND4Q6ZU67 534 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 RRM2BQ7LG56 351 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 UEVLDQ8IX04 471 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 APH1AQ96BI3 265 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 FAM46AQ96IP4 442 aaKnown RBP16.74■□□□□ 0.27
LMNB1-204ENST00000463908 TNFRSF13CQ96RJ3 184 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 CENPEQ02224 2701 aa16.74■□□□□ 0.27
LMNB1-204ENST00000463908 TNFRSF11BO00300 401 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 KLF4O43474 513 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 FKBP6O75344 327 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 PTP4A3O75365 173 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 OR6A2O95222 327 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 ADAP00813 363 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 FOXG1P55316 489 aaPredicted RBP16.73■□□□□ 0.27
LMNB1-204ENST00000463908 RPS4XP62701 263 aaKnown RBP16.73■□□□□ 0.27
LMNB1-204ENST00000463908 IL1RL1Q01638 556 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 POU3F1Q03052 451 aaPredicted RBP16.73■□□□□ 0.27
LMNB1-204ENST00000463908 LGALS3BPQ08380 585 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 FBXW9Q5XUX1 488 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 CASP12Q6UXS9 341 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 STAC2Q6ZMT1 411 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 NANOGNBQ7Z5D8 188 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 STK32CQ86UX6 486 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 DMRTC2Q8IXT2 367 aaPredicted RBP16.73■□□□□ 0.27
LMNB1-204ENST00000463908 CDK20Q8IZL9 346 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 LRRC75AQ8NAA5 344 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 OR51A7Q8NH64 312 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 DUS3LQ96G46 650 aaKnown RBP16.73■□□□□ 0.27
LMNB1-204ENST00000463908 SPOCK3Q9BQ16 436 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 EMC6Q9BV81 110 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 SLC7A10Q9NS82 523 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 MED29Q9NX70 200 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 HIF3AQ9Y2N7 669 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 NOX1Q9Y5S8 564 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 CRYBG3Q68DQ2 2970 aa16.73■□□□□ 0.27
LMNB1-204ENST00000463908 CACNA1CQ13936 2221 aa16.72■□□□□ 0.27
LMNB1-204ENST00000463908 RNF13O43567 381 aa16.72■□□□□ 0.27
LMNB1-204ENST00000463908 CNOT4O95628 575 aaKnown RBP16.72■□□□□ 0.27
LMNB1-204ENST00000463908 F13BP05160 661 aa16.72■□□□□ 0.27
LMNB1-204ENST00000463908 POU2F1P14859 743 aa16.72■□□□□ 0.27
LMNB1-204ENST00000463908 ZNF26P17031 533 aaPredicted RBP16.72■□□□□ 0.27
LMNB1-204ENST00000463908 NIPAL3Q6P499 406 aa16.72■□□□□ 0.27
LMNB1-204ENST00000463908 Q6ZT83 130 aa16.72■□□□□ 0.27
LMNB1-204ENST00000463908 C22orf34Q6ZV56 151 aa16.72■□□□□ 0.27
LMNB1-204ENST00000463908 CXorf67Q86X51 503 aaPredicted RBP16.72■□□□□ 0.27
LMNB1-204ENST00000463908 OR13C2Q8NGS9 318 aa16.72■□□□□ 0.27
LMNB1-204ENST00000463908 LRRC46Q96FV0 321 aa16.72■□□□□ 0.27
LMNB1-204ENST00000463908 TMCC3Q9ULS5 477 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms