RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 PAIP1Q9H074 479 aaKnown RBP17.18■□□□□ 0.34
VARS-221ENST00000463184 RASD1Q9Y272 281 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 CAPN7Q9Y6W3 813 aa17.18■□□□□ 0.34
VARS-221ENST00000463184 ANGPT2O15123 496 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 FRS3O43559 492 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 KRT75O95678 551 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 ERCC1P07992 297 aaPredicted RBP17.17■□□□□ 0.34
VARS-221ENST00000463184 TFPTP0C1Z6 253 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 GIFP27352 417 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 SH3BGRP55822 239 aaPredicted RBP17.17■□□□□ 0.34
VARS-221ENST00000463184 LGALS3BPQ08380 585 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 ZSWIM7Q19AV6 140 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 CR1LQ2VPA4 569 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 PAGE3Q5JUK9 113 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 LRIF1Q5T3J3 769 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 C1orf140Q5VVS0 124 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 PRAMEF8Q5VWM4 474 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 PRAMEF7Q5VXH5 474 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 NIPAL3Q6P499 406 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 EPHX4Q8IUS5 362 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 ANKK1Q8NFD2 765 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 NEU4Q8WWR8 484 aaPredicted RBP17.17■□□□□ 0.34
VARS-221ENST00000463184 ZNF442Q9H7R0 627 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 SLC6A13Q9NSD5 602 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 CALML5Q9NZT1 146 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 ARL2BPQ9Y2Y0 163 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 PCDHB14Q9Y5E9 798 aa17.17■□□□□ 0.34
VARS-221ENST00000463184 A0A096LPE4 126 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 A0A1W2PPZ6 126 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 NPIPB7O75200 414 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 UPK3AO75631 287 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 IGKV3-15P01624 115 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 CALCRP30988 508 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 CHN2P52757 468 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 MAPK11Q15759 364 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 ZNF836Q6ZNA1 936 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 LINGO2Q7L985 606 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 VRK2Q86Y07 508 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 RFLNBQ8N5W9 214 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 DPP10Q8N608 796 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 PNPT1Q8TCS8 783 aaKnown RBP17.16■□□□□ 0.34
VARS-221ENST00000463184 STK35Q8TDR2 534 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 HPS1Q92902 700 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 SOX7Q9BT81 388 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 TPT1P8Q9HAU6 139 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 P2RX2Q9UBL9 471 aa17.16■□□□□ 0.34
VARS-221ENST00000463184 LRP5LA4QPB2 252 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 RPL36A-HNRNPH2H7BZ11 118 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 FAM107AO95990 144 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 TACSTD2P09758 323 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 DAOP14920 347 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 CBR1P16152 277 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 HOXB9P17482 250 aaPredicted RBP17.15■□□□□ 0.34
VARS-221ENST00000463184 TUBA1BP68363 451 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 TUBA4AP68366 448 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 GTDC1Q4AE62 458 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 TUBA1AQ71U36 451 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 MFSD8Q8NHS3 518 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 ANKRD27Q96NW4 1050 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 DOK1Q99704 481 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 MYLK2Q9H1R3 596 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 NELFAQ9H3P2 528 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 ARMC7Q9H6L4 198 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 SLAMF8Q9P0V8 285 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 ARMCX1Q9P291 453 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 DSPPQ9NZW4 1301 aa17.15■□□□□ 0.34
VARS-221ENST00000463184 BBIP1A8MTZ0 92 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 hCG_2039718K7EN88 272 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 TCF21O43680 179 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 NPR2P20594 1047 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 CRISP3P54108 245 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 ROR2Q01974 943 aaKnown RBP17.14■□□□□ 0.33
VARS-221ENST00000463184 HGFACQ04756 655 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 LARS2Q15031 903 aaKnown RBP17.14■□□□□ 0.33
VARS-221ENST00000463184 COQ5Q5HYK3 327 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 RNF220Q5VTB9 566 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 UGT2A3Q6UWM9 527 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 RETREG3Q86VR2 466 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 RAD21L1Q9H4I0 556 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 TMEFF2Q9UIK5 374 aaPredicted RBP17.14■□□□□ 0.33
VARS-221ENST00000463184 ZNF232Q9UNY5 417 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 RCE1Q9Y256 329 aa17.14■□□□□ 0.33
VARS-221ENST00000463184 ZNF443Q9Y2A4 671 aaPredicted RBP17.14■□□□□ 0.33
VARS-221ENST00000463184 LOC100653049A0A140TA62 436 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 TMEM229AB2RXF0 380 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 CLIC1O00299 241 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 LILRA1O75019 489 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 KRT34O76011 436 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 AHSA1O95433 338 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 ZNF43P17038 809 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 PPIBP23284 216 aaKnown RBP17.13■□□□□ 0.33
VARS-221ENST00000463184 THBS4P35443 961 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 CYLC2Q14093 348 aaPredicted RBP17.13■□□□□ 0.33
VARS-221ENST00000463184 GKAP1Q5VSY0 366 aaPredicted RBP17.13■□□□□ 0.33
VARS-221ENST00000463184 DLEU7Q6UYE1 221 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 SNX32Q86XE0 403 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 MSRB3Q8IXL7 192 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 ZNF786Q8N393 782 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 CLIP4Q8N3C7 705 aa17.13■□□□□ 0.33
VARS-221ENST00000463184 LINC01356Q8N9X3 169 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms