RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 MOKQ9UQ07 419 aa16.53■□□□□ 0.24
VARS-220ENST00000461874 A0A096LPE4 126 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 IGHV1-18A0A0C4DH31 117 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 A0A0G2JND7 137 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 A0A1W2PPZ6 126 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 MS4A18H0YCH9 400 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 H7C417 338 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 M0QX08 132 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 TRAF3IP2O43734 574 aaPredicted RBP16.52■□□□□ 0.24
VARS-220ENST00000461874 SLC43A1O75387 559 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 HOXB1P14653 301 aaPredicted RBP16.52■□□□□ 0.24
VARS-220ENST00000461874 CBLP22681 906 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 CDH12P55289 794 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 NFYCQ13952 458 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 RAB35Q15286 201 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 MS4A18Q3C1V0 323 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 SWT1Q5T5J6 900 aaKnown RBP16.52■□□□□ 0.24
VARS-220ENST00000461874 METTL21CQ5VZV1 264 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 RANBP3LQ86VV4 465 aaPredicted RBP16.52■□□□□ 0.24
VARS-220ENST00000461874 ARHGDIGQ99819 225 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 NELFAQ9H3P2 528 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 KAT8Q9H7Z6 458 aaKnown RBP16.52■□□□□ 0.24
VARS-220ENST00000461874 GPR35Q9HC97 309 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 CORINQ9Y5Q5 1042 aa16.52■□□□□ 0.24
VARS-220ENST00000461874 FMO6PO60774 539 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 SASH3O75995 380 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 HPRP00739 348 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 BGLAPP02818 100 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 C8BP07358 591 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 NUDT6P53370 316 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 ARF1P84077 181 aaKnown RBP16.51■□□□□ 0.23
VARS-220ENST00000461874 IL1RL1Q01638 556 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 CHRNB3Q05901 458 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 DUSP7Q16829 419 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 C3orf36Q3SXR2 165 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 TMEM123Q8N131 208 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 GPR137CQ8N3F9 429 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 FAM169BQ8N8A8 192 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 SCAIQ8N9R8 606 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 GPR32P1Q8NGA4 272 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 OR10H5Q8NGA6 315 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 OR2M2Q96R28 347 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 MCHR1Q99705 422 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 RHNO1Q9BSD3 238 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 TMEM43Q9BTV4 400 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 KATNB1Q9BVA0 655 aa16.51■□□□□ 0.23
VARS-220ENST00000461874 CRNNQ9UBG3 495 aaPredicted RBP16.51■□□□□ 0.23
VARS-220ENST00000461874 M0R3H8 397 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 AKAP8O43823 692 aaKnown RBP16.5■□□□□ 0.23
VARS-220ENST00000461874 OPN1SWP03999 348 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 BMP4P12644 408 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 NQO1P15559 274 aaKnown RBP16.5■□□□□ 0.23
VARS-220ENST00000461874 DSCR9P59020 149 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 TUBA1BP68363 451 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 TUBA4AP68366 448 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 ZNF613Q6PF04 617 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 NHLRC1Q6VVB1 395 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 TUBA1AQ71U36 451 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 PRIMA1Q86XR5 153 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 SLC30A8Q8IWU4 369 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 UEVLDQ8IX04 471 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 PIK3C3Q8NEB9 887 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 HTRA1Q92743 480 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 ZNF837Q96EG3 531 aaPredicted RBP16.5■□□□□ 0.23
VARS-220ENST00000461874 MOGAT1Q96PD6 335 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 ASPNQ9BXN1 380 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 CRLF2Q9HC73 371 aa16.5■□□□□ 0.23
VARS-220ENST00000461874 MOV10Q9HCE1 1003 aaKnown RBP16.5■□□□□ 0.23
VARS-220ENST00000461874 MRPL39Q9NYK5 338 aaKnown RBP16.5■□□□□ 0.23
VARS-220ENST00000461874 IGHV4-30-2A0A087WSY4 118 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 IGLV1-44P01699 117 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 CRYAAP02489 173 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 HLA-DOBP13765 273 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 PMS2P3Q13401 168 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 NPTX1Q15818 432 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 SWI5Q1ZZU3 235 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 MST1LQ2TV78 715 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 CEACAM16Q2WEN9 425 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 CLEC2AQ6UVW9 174 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 LINC00114Q6XXX2 140 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 PATL1Q86TB9 770 aaKnown RBP16.49■□□□□ 0.23
VARS-220ENST00000461874 OR6T1Q8NGN1 323 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 OR10A6Q8NH74 314 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 KCNS3Q9BQ31 491 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 PMF1-BGLAPU3KQ54 211 aa16.49■□□□□ 0.23
VARS-220ENST00000461874 ANK3Q12955 4377 aaKnown RBP16.49■□□□□ 0.23
VARS-220ENST00000461874 FBP2O00757 339 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 IGKV3-15P01624 115 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 CECR9P0C854 216 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 PCGF2P35227 344 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 GZMMP51124 257 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 EFNA4P52798 201 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 NAAAQ02083 359 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 PHYHD1Q5SRE7 291 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 C20orf196Q8IYI0 205 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 C10orf53Q8N6V4 93 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 TAMM41Q96BW9 452 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 FBXO17Q96EF6 278 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 TMEM120AQ9BXJ8 343 aa16.48■□□□□ 0.23
VARS-220ENST00000461874 NOX1Q9Y5S8 564 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms