RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 REP15Q6BDI9 236 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 KRT80Q6KB66 452 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 ANKRD16Q6P6B7 361 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 TUBA1AQ71U36 451 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 AAED1Q7RTV5 226 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 C1QL2Q7Z5L3 287 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 GPAT4Q86UL3 456 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 SLC22A9Q8IVM8 553 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 CDK20Q8IZL9 346 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 CCNYL1Q8N7R7 359 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 POMGNT2Q8NAT1 580 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 NUP37Q8NFH4 326 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 OR56A1Q8NGH5 318 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 OR1K1Q8NGR3 316 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 CLHC1Q8NHS4 586 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 FBXO25Q8TCJ0 367 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 HOXB13Q92826 284 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-206ENST00000461574 DDIT4LQ96D03 193 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 RAB39BQ96DA2 213 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 FAM120BQ96EK7 910 aaKnown RBP4.33□□□□□ -1.72
BRCA1-206ENST00000461574 AURKBQ96GD4 344 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-206ENST00000461574 PKNOX2Q96KN3 472 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 EGLN2Q96KS0 407 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 TSSK3Q96PN8 268 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 DUX5Q96PT3 197 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 ALKBH3Q96Q83 286 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-206ENST00000461574 ACTRT3Q9BYD9 372 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 OR11A1Q9GZK7 315 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 MS4A5Q9H3V2 200 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 PIGUQ9H490 435 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 REEP4Q9H6H4 257 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF442Q9H7R0 627 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 UNKLQ9H9P5 680 aaKnown RBP4.33□□□□□ -1.72
BRCA1-206ENST00000461574 ESM1Q9NQ30 184 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 ACSS1Q9NUB1 689 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-206ENST00000461574 GRHL1Q9NZI5 618 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM181Q9P2C4 612 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 CMAHPQ9Y471 501 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 NOX1Q9Y5S8 564 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 FLVCR1Q9Y5Y0 555 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 SAR1BQ9Y6B6 198 aa4.33□□□□□ -1.72
BRCA1-206ENST00000461574 CMYA5Q8N3K9 4069 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 WNK2Q9Y3S1 2297 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 TRBV23-1A0A0A0MS06 115 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 A0A1W2PPW3 197 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 TRIM49D1C9J1S8 452 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 POC1B-GALNT4F8VUJ3 575 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 J3QLI3 93 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 PDLIM1O00151 329 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 NR5A2O00482 541 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CFLARO15519 480 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 RAD51CO43502 376 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 SYNGR3O43761 229 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 SCN2BO60939 215 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 PRSS23O95084 383 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 LGI1O95970 557 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 NUDT17P0C025 328 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 UQCRBP14927 111 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 SDC1P18827 310 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 IMPDH1P20839 514 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ATP5F1P24539 256 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 FKBP2P26885 142 aaKnown RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CALCRP30988 508 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CCT3P49368 545 aaKnown RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CLK1P49759 484 aaKnown RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 SH3BGRP55822 239 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 GNG11P61952 73 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 RPL38P63173 70 aaKnown RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 C2orf54Q08AI8 447 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ZP4Q12836 540 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 HNRNPA0Q13151 305 aaKnown RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 SLC9B1Q4ZJI4 515 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ARMCX4Q5H9R4 360 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CFAP157Q5JU67 520 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 FAM209AQ5JX71 171 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 GKAP1Q5VSY0 366 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 FOXB2Q5VYV0 432 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 KANK2Q63ZY3 851 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 TMEM225Q6GV28 225 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ACSM5Q6NUN0 579 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 EIF3MQ7L2H7 374 aaKnown RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 C16orf62Q7Z3J2 963 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 GRINAQ7Z429 371 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 R3HCC1LQ7Z5L2 792 aaKnown RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CARM1Q86X55 608 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ZDHHC22Q8N966 263 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 MGARPQ8TDB4 240 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 DCAKDQ8WVC6 231 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 RDH5Q92781 318 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 SLC25A28Q96A46 364 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF524Q96C55 264 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF764Q96H86 408 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CCT8L2Q96SF2 557 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 PAFAH2Q99487 392 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 DOK1Q99704 481 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 NAPGQ99747 312 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CCT7Q99832 543 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 PKP2Q99959 881 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 CCDC106Q9BWC9 280 aa4.32□□□□□ -1.72
BRCA1-206ENST00000461574 ZNF416Q9BWM5 594 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms