RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 WDR88Q6ZMY6 472 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 LURAP1LQ8IV03 231 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 C17orf78Q8N4C9 275 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 PIK3C3Q8NEB9 887 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 GEMIN6Q8WXD5 167 aaKnown RBP18.03■□□□□ 0.48
SCAF8-204ENST00000461219 ALPK1Q96QP1 1244 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 CCT8L2Q96SF2 557 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 FKRPQ9H9S5 495 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 B3GAT2Q9NPZ5 323 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 NDE1Q9NXR1 346 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 RPS6KA6Q9UK32 745 aa18.03■□□□□ 0.48
SCAF8-204ENST00000461219 MAGED1Q9Y5V3 778 aaPredicted RBP18.03■□□□□ 0.48
SCAF8-204ENST00000461219 RAI1Q7Z5J4 1906 aaPredicted RBP18.02■□□□□ 0.48
SCAF8-204ENST00000461219 MS4A18H0YCH9 400 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 RNF13O43567 381 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 SMPD2O60906 423 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 NCK1P16333 377 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 RBM34P42696 430 aaKnown RBP18.02■□□□□ 0.48
SCAF8-204ENST00000461219 FOXG1P55316 489 aaPredicted RBP18.02■□□□□ 0.48
SCAF8-204ENST00000461219 PRPS1P60891 318 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 UBE2NP61088 152 aaKnown RBP18.02■□□□□ 0.48
SCAF8-204ENST00000461219 LTBQ06643 244 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 ST3GAL3Q11203 375 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 ZNF74Q16587 644 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 MS4A18Q3C1V0 323 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 C8orf82Q6P1X6 216 aaPredicted RBP18.02■□□□□ 0.48
SCAF8-204ENST00000461219 TMEM108Q6UXF1 575 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 NANOGNBQ7Z5D8 188 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 CYP4Z1Q86W10 505 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 DEPDC4Q8N2C3 294 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 AKAP1Q92667 903 aaKnown RBP eCLIP18.02■□□□□ 0.48
SCAF8-204ENST00000461219 PRRC1Q96M27 445 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 HS6ST2Q96MM7 605 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 MUS81Q96NY9 551 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 FNDC11Q9BVV2 318 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 LINC00470Q9BZP3 86 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 BEX4Q9NWD9 120 aaPredicted RBP18.02■□□□□ 0.48
SCAF8-204ENST00000461219 B3GAT1Q9P2W7 334 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 ABCD2Q9UBJ2 740 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 EGFL7Q9UHF1 273 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 POU2F3Q9UKI9 436 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 MED31Q9Y3C7 131 aa18.02■□□□□ 0.48
SCAF8-204ENST00000461219 LOC102725191A0A1B0GVB3 256 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 M0R1B8 84 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 PLPP3O14495 311 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 HS3ST1O14792 307 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 UPK3AO75631 287 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 PLAUP00749 431 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 THY1P04216 161 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 THRBP10828 461 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 LOXP28300 417 aaPredicted RBP18.01■□□□□ 0.47
SCAF8-204ENST00000461219 MNAT1P51948 309 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 ROR2Q01974 943 aaKnown RBP18.01■□□□□ 0.47
SCAF8-204ENST00000461219 LGALS3BPQ08380 585 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 ADAM5Q6NVV9 412 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 C16orf89Q6UX73 402 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 VTCN1Q7Z7D3 282 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 PIAS4Q8N2W9 510 aaPredicted RBP18.01■□□□□ 0.47
SCAF8-204ENST00000461219 RNF148Q8N7C7 305 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 OR6N1Q8NGY5 312 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 TMEM255BQ8WV15 326 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 TMEM239Q8WW34 195 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 MBD6Q96DN6 1003 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 HSH2DQ96JZ2 352 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 C1QTNF6Q9BXI9 259 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 SLC17A5Q9NRA2 495 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 ZNF229Q9UJW7 825 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 ROS1P08922 2347 aa18.01■□□□□ 0.47
SCAF8-204ENST00000461219 PDLIM1O00151 329 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 ABCD4O14678 606 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 FZD7O75084 574 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 HPRP00739 348 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 MT-ND1P03886 318 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 CD53P19397 219 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 TCN1P20061 433 aaPredicted RBP18■□□□□ 0.47
SCAF8-204ENST00000461219 YAP1P46937 504 aaKnown RBP18■□□□□ 0.47
SCAF8-204ENST00000461219 SH3BGRP55822 239 aaPredicted RBP18■□□□□ 0.47
SCAF8-204ENST00000461219 GLYATQ6IB77 296 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 CBLL1Q75N03 491 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 PXKQ7Z7A4 578 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 TSPYL5Q86VY4 417 aaPredicted RBP18■□□□□ 0.47
SCAF8-204ENST00000461219 NKAIN4Q8IVV8 208 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 ANKS4BQ8N8V4 417 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 CCDC197Q8NCU1 140 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 ANKK1Q8NFD2 765 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 TMEM171Q8WVE6 324 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 FBXW5Q969U6 566 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 SGTBQ96EQ0 304 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 KCNS3Q9BQ31 491 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 EMC6Q9BV81 110 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 ARL8BQ9NVJ2 186 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 MED29Q9NX70 200 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 MGAT4BQ9UQ53 548 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 SLC25A15Q9Y619 301 aa18■□□□□ 0.47
SCAF8-204ENST00000461219 BLOC1S5-TXNDC5H3BN57 136 aa17.99■□□□□ 0.47
SCAF8-204ENST00000461219 M0R3G1 203 aa17.99■□□□□ 0.47
SCAF8-204ENST00000461219 TRAF3IP2O43734 574 aaPredicted RBP17.99■□□□□ 0.47
SCAF8-204ENST00000461219 LYPD3O95274 346 aa17.99■□□□□ 0.47
SCAF8-204ENST00000461219 FAM107AO95990 144 aa17.99■□□□□ 0.47
SCAF8-204ENST00000461219 HLA-DOBP13765 273 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms