RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 IGHV3OR16-13A0A075B7E8 117 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 IGHV1OR21-1A0A087WYE8 117 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 CXCL11O14625 94 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 NBR2O15453 112 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 ZNF861PO60384 105 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 SCGNO76038 276 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 SNAPINO95295 136 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 STAMBPO95630 424 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 AP2A1O95782 977 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 IGLV1-47P01700 117 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 CD1EP15812 388 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 CCT3P49368 545 aaKnown RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 KLK7P49862 253 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 CAV2P51636 162 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 CRYBB1P53674 252 aaPredicted RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 CSNK1G2P78368 415 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 VGLL4Q14135 290 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 CARD16Q5EG05 197 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 OR4F3Q6IEY1 312 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 ZSCAN25Q6NSZ9 544 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 RGS9BPQ6ZS82 235 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 ZNF679Q8IYX0 411 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 RDH10Q8IZV5 341 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 C6orf223Q8N319 242 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 NEIL3Q8TAT5 605 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 RAPGEF5Q92565 580 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 MARC2Q969Z3 335 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 SLC38A2Q96QD8 506 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 SECISBP2Q96T21 854 aaKnown RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 TMEM43Q9BTV4 400 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 CAPS2Q9BXY5 557 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 RAB34Q9BZG1 259 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 SELENOIQ9C0D9 397 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 VCX2Q9H322 139 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 SUDS3Q9H7L9 328 aaPredicted RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 YY1AP1Q9H869 796 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 TTC21BQ7Z4L5 1316 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 CPDO75976 1380 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 KDM6AO15550 1401 aaPredicted RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 YTHDC2Q9H6S0 1430 aaKnown RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 KNDC1Q76NI1 1749 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 TIAM2Q8IVF5 1701 aa2.3□□□□□ -2.04
RFC4-211ENST00000460408 N4BP2Q86UW6 1770 aaPredicted RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 RAI1Q7Z5J4 1906 aaPredicted RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 SPTBN5Q9NRC6 3674 aaKnown RBP2.3□□□□□ -2.04
RFC4-211ENST00000460408 PRRC2AP48634 2157 aaKnown RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 SBF1O95248 1867 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 SCN4AP35499 1836 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 LAMB4A4D0S4 1761 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 ALS2Q96Q42 1657 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 ABCC6O95255 1503 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 ANKARQ7Z5J8 1434 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 SH3TC1Q8TE82 1336 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 KRTAP4-16G5E9R7 235 aaPredicted RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 GFYI3L273 518 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 SUPT7LO94864 414 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 DIRAS1O95057 198 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 ACTL6AO96019 429 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 ZNF853P0CG23 659 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 DBTP11182 482 aaKnown RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 GABRR1P24046 479 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 CALCRP30988 508 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 UGT1A5P35504 534 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 RBMXP38159 391 aaKnown RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 DDOSTP39656 456 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 RPL13AP40429 203 aaKnown RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 APOC4P55056 127 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 TLE4Q04727 773 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 PSG7Q13046 419 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 DAZ2Q13117 558 aaKnown RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 ORC2Q13416 577 aaPredicted RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 DPYSL2Q16555 572 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 LRRC23Q53EV4 343 aaPredicted RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 TMEM31Q5JXX7 168 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 PDZK1Q5T2W1 519 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 CASC10Q5T4H9 136 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 C1orf146Q5VVC0 180 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 CENPPQ6IPU0 288 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 RFLNAQ6ZTI6 216 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 GDPD3Q7L5L3 318 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 CCDC50Q8IVM0 306 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 BRSK1Q8TDC3 778 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 DNAJA4Q8WW22 397 aaPredicted RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 UBE2E3Q969T4 207 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 TMEM101Q96IK0 257 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 SLC35E1Q96K37 410 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 RNF2Q99496 336 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 NPAS2Q99743 824 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 C20orf85Q9H1P6 137 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 FOLH1BQ9HBA9 442 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 DAZ3Q9NR90 486 aaKnown RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 NYAP2Q9P242 653 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 BTNL2Q9UIR0 455 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 ADAM28Q9UKQ2 775 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 STAP1Q9ULZ2 295 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 NEUROG3Q9Y4Z2 214 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 CDH10Q9Y6N8 788 aa2.29□□□□□ -2.04
RFC4-211ENST00000460408 RANBP2P49792 3224 aaKnown RBP2.29□□□□□ -2.04
RFC4-211ENST00000460408 EPG5Q9HCE0 2579 aa2.28□□□□□ -2.04
RFC4-211ENST00000460408 WI2-2373I1.2A0A1W2PRP0 233 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms