RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SWI5Q1ZZU3 235 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 CCDC86Q9H6F5 360 aaKnown RBP14.13□□□□□ -0.15
LMNB1-203ENST00000460265 MKL2Q9ULH7 1088 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 SLC35A3Q9Y2D2 325 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 TRBV2A0A0J9YWF9 115 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 MFSD2BA6NFX1 497 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 TVP23AA6NH52 213 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 L7N2F9 121 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 SIGLEC5O15389 551 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 SULT1B1O43704 296 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 BRINP1O60477 761 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 AK1P00568 194 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 ATP1B1P05026 303 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF806P0C7X5 589 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 EVX1P49640 407 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 MEOX2P50222 304 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 SIGLEC14Q08ET2 396 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 CAMK2DQ13557 499 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 CORO6Q6QEF8 472 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 KIRREL2Q6UWL6 708 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 NLRC3Q7RTR2 1065 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 OR2T4Q8NH00 348 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 ANKRD9Q96BM1 317 aaPredicted RBP14.13□□□□□ -0.15
LMNB1-203ENST00000460265 ELF4Q99607 663 aaPredicted RBP14.13□□□□□ -0.15
LMNB1-203ENST00000460265 G6PC3Q9BUM1 346 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 DPAGT1Q9H3H5 408 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 TESQ9UGI8 421 aaKnown RBP14.13□□□□□ -0.15
LMNB1-203ENST00000460265 PCOLCE2Q9UKZ9 415 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 AK6Q9Y3D8 172 aaKnown RBP14.13□□□□□ -0.15
LMNB1-203ENST00000460265 CACNG2Q9Y698 323 aa14.13□□□□□ -0.15
LMNB1-203ENST00000460265 GPR179Q6PRD1 2367 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 LAMA1P25391 3075 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 IGHV5-51A0A0C4DH38 117 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 E9PI62 339 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 CDC40O60508 579 aaKnown RBP eCLIP14.12□□□□□ -0.15
LMNB1-203ENST00000460265 EEF1A1P68104 462 aaKnown RBP14.12□□□□□ -0.15
LMNB1-203ENST00000460265 PSG6Q00889 435 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 AADACL4Q5VUY2 407 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 LEG1Q6P5S2 330 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 ULK3Q6PHR2 472 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 LYPD4Q6UWN0 246 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF704Q6ZNC4 412 aaPredicted RBP14.12□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF511Q8NB15 262 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 SMRP1Q8NCR6 262 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 TSLPQ969D9 159 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 YIPF5Q969M3 257 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 RASD2Q96D21 266 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 TM4SF19Q96DZ7 209 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 ENAMQ9NRM1 1142 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 RASD1Q9Y272 281 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 RAD1O60671 282 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 CTNSO60931 367 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 NDUFB2O95178 105 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 THBS1P07996 1170 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 AQP2P41181 271 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 E2F1Q01094 437 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 CD276Q5ZPR3 534 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 CD300LDQ6UXZ3 194 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 THEM6Q8WUY1 208 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 RFT1Q96AA3 541 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 METTL17Q9H7H0 456 aaPredicted RBP14.12□□□□□ -0.15
LMNB1-203ENST00000460265 C14orf105Q9NVL8 296 aa14.12□□□□□ -0.15
LMNB1-203ENST00000460265 LSM2Q9Y333 95 aaKnown RBP14.12□□□□□ -0.15
LMNB1-203ENST00000460265 TP53BP1Q12888 1972 aaPredicted RBP14.12□□□□□ -0.15
LMNB1-203ENST00000460265 A0A1B0GVI7 797 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 C2orf72A6NCS6 295 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 ANKRD61A6NGH8 418 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 EEF1E1O43324 174 aaKnown RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 LPLP06858 475 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 HIST1H1CP16403 213 aaKnown RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 CD1CP29017 333 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 OR10A3P58181 314 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 CTXN1P60606 82 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 FAM53BQ14153 422 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 IZUMO1Q8IYV9 350 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 GHSRQ92847 366 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 ELMOD3Q96FG2 381 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 ADAD1Q96M93 576 aaKnown RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 PDCD1LG2Q9BQ51 273 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 MEPEQ9NQ76 525 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 MRPL15Q9P015 296 aaKnown RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 POMT2Q9UKY4 750 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 CDV3Q9UKY7 258 aaKnown RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 ALDOBP05062 364 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 CXCR1P25024 350 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 SLC6A1P30531 599 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 TPBGQ13641 420 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 ACSM3Q53FZ2 586 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 HEPHL1Q6MZM0 1159 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 TMEM184AQ6ZMB5 413 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 OR4D10Q8NGI6 311 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 ZDHHC12Q96GR4 267 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 THAP7Q9BT49 309 aaPredicted RBP14.11□□□□□ -0.15
LMNB1-203ENST00000460265 SARGQ9BW04 601 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 ANKRD19PQ9H560 264 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 SCP2D1Q9UJQ7 156 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 IGHV3-20A0A0C4DH32 117 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 SGCEO43556 437 aa14.11□□□□□ -0.15
LMNB1-203ENST00000460265 RNF13O43567 381 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms