RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SH3PXD2BA1X283 911 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 ZC3H12DA2A288 527 aaKnown RBP9.33□□□□□ -0.92
USP39-210ENST00000459775 RGS13O14921 159 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 NDUFS6O75380 124 aaKnown RBP9.33□□□□□ -0.92
USP39-210ENST00000459775 WISP2O76076 250 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 SNAP29O95721 258 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 FPR1P21462 350 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 LCN1P31025 176 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 CLK3P49761 638 aaKnown RBP9.33□□□□□ -0.92
USP39-210ENST00000459775 P2RX1P51575 399 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 HMGA2P52926 109 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 UGT2B15P54855 530 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 SOX8P57073 446 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 ARG2P78540 354 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 DYRK1AQ13627 763 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 MICAQ29983 383 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 ZNF770Q6IQ21 691 aaPredicted RBP9.33□□□□□ -0.92
USP39-210ENST00000459775 METAP1DQ6UB28 335 aaPredicted RBP9.33□□□□□ -0.92
USP39-210ENST00000459775 Q6ZPB1 254 aaPredicted RBP9.33□□□□□ -0.92
USP39-210ENST00000459775 NRMQ8IXM6 262 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 ATP6V1C2Q8NEY4 427 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 OR2M3Q8NG83 312 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 OR10G2Q8NGC3 310 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 OR4K5Q8NGD3 323 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 GIPC3Q8TF64 312 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 HTRA1Q92743 480 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 EPYCQ99645 322 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.33□□□□□ -0.92
USP39-210ENST00000459775 TMEM185BQ9H7F4 350 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 MEPEQ9NQ76 525 aaPredicted RBP9.33□□□□□ -0.92
USP39-210ENST00000459775 DECR2Q9NUI1 292 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 CNIH4Q9P003 139 aa9.33□□□□□ -0.92
USP39-210ENST00000459775 TMEFF2Q9UIK5 374 aaPredicted RBP9.33□□□□□ -0.92
USP39-210ENST00000459775 MED12Q93074 2177 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 LRRC3CA6NJW4 275 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 ZNF98A6NK75 572 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 K7ENP7 123 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 EFNA2O43921 213 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 OR10H3O60404 316 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 CLIC3O95833 236 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 P04436 131 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 ALPLP05186 524 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 RAB4AP20338 218 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 CBLP22681 906 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 AHCYP23526 432 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 VHLP40337 213 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 GPR4P46093 362 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 PSPHP78330 225 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 PMP22Q01453 160 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 ST3GAL3Q11203 375 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 MFAP5Q13361 173 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 DGCR6Q14129 220 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 DCST1Q5T197 706 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 INO80CQ6PI98 192 aaPredicted RBP9.32□□□□□ -0.92
USP39-210ENST00000459775 KLHL17Q6TDP4 642 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 ZNF730Q6ZMV8 503 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 GPR141Q7Z602 305 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 SULF2Q8IWU5 870 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 AQP11Q8NBQ7 271 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 FAM46AQ96IP4 442 aaKnown RBP9.32□□□□□ -0.92
USP39-210ENST00000459775 EAF1Q96JC9 268 aaPredicted RBP9.32□□□□□ -0.92
USP39-210ENST00000459775 EXOSC3Q9NQT5 275 aaKnown RBP9.32□□□□□ -0.92
USP39-210ENST00000459775 SACM1LQ9NTJ5 587 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 MED17Q9NVC6 651 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 PTTG2Q9NZH5 202 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 RPS6KB2Q9UBS0 482 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 OR5H15A6NDH6 313 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 EIF4E2O60573 245 aaKnown RBP9.32□□□□□ -0.92
USP39-210ENST00000459775 CCNB2O95067 398 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 ALX3O95076 343 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 CSTBP04080 98 aaKnown RBP9.32□□□□□ -0.92
USP39-210ENST00000459775 CELA3AP09093 270 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 PRKCAP17252 672 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 COPZ1P61923 177 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 FOXF1Q12946 379 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 TRAM2Q15035 370 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 GXYLT1Q4G148 440 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 C6orf52Q5T4I8 152 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 PGBD2Q6P3X8 592 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 PLCZ1Q86YW0 608 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 LRRC17Q8N6Y2 441 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 ATG16L2Q8NAA4 619 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 MDS2Q8NDY4 140 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 OR4K17Q8NGC6 315 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 TNFRSF14Q92956 283 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 POP5Q969H6 163 aaKnown RBP9.32□□□□□ -0.92
USP39-210ENST00000459775 NTNG2Q96CW9 530 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 BCL2L14Q9BZR8 327 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 OR11A1Q9GZK7 315 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 NRIP3Q9NQ35 241 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 ZNF275Q9NSD4 429 aaPredicted RBP9.32□□□□□ -0.92
USP39-210ENST00000459775 ASH2LQ9UBL3 628 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 IL20RAQ9UHF4 553 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 OSGIN1Q9UJX0 560 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 DIMT1Q9UNQ2 313 aaKnown RBP9.32□□□□□ -0.92
USP39-210ENST00000459775 GMPPBQ9Y5P6 360 aa9.32□□□□□ -0.92
USP39-210ENST00000459775 IGKV1D-42A0A075B6H8 117 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 CDC42EP2O14613 210 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 SLC22A1O15245 554 aa9.31□□□□□ -0.92
USP39-210ENST00000459775 ZNHIT1O43257 154 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms