RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 LRRC61Q9BV99 259 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 BEX2Q9BXY8 128 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 SEMA4CQ9C0C4 833 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 C20orf85Q9H1P6 137 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 PPIL3Q9H2H8 161 aaKnown RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 CHRDQ9H2X0 955 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 GALNT9Q9HCQ5 603 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 SOHLH2Q9NX45 425 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 WSB2Q9NYS7 404 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-202ENST00000459727 COPS7AQ9UBW8 275 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF222Q9UK12 451 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 FKBP7Q9Y680 259 aa8.07□□□□□ -1.12
HDAC3-202ENST00000459727 MDC1Q14676 2089 aaKnown RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 IGKV1D-42A0A075B6H8 117 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 TRAV36DV7A0A075B6V5 113 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 A0A0A6YYH2 397 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 OR6C68A6NDL8 312 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 A6NJ64 397 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 ANXA2P2A6NMY6 339 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 C17orf105B2RV13 164 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 FABP7O15540 132 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 SSNA1O43805 119 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 SELENOFO60613 162 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 UTS2O95399 124 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 ANXA2P07355 339 aaKnown RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 CSF1P09603 554 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 CD3GP09693 182 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 PRKCAP17252 672 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 PSMB1P20618 241 aaKnown RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 CD27P26842 260 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 CD1CP29017 333 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 EVI2BP34910 448 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 HTR2BP41595 481 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 MECP2P51608 486 aaKnown RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 AGFG1P52594 562 aaKnown RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 CTXN1P60606 82 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 ERVK-25P63136 954 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 SNRPNP63162 240 aaKnown RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 DGCR2P98153 550 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 GALK2Q01415 458 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 MFSD13AQ14CX5 517 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 FCN2Q15485 313 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 DEFB110Q30KQ9 67 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 TMEM69Q5SWH9 247 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 ZBTB37Q5TC79 503 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 LINC01590Q5TEZ4 76 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 FAM205BPQ63HN1 556 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 KCTD18Q6PI47 426 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 DNM1P34Q6PK57 102 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 CDC20BQ86Y33 519 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 KMT5CQ86Y97 462 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 TIGD4Q8IY51 512 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 CMTM4Q8IZR5 234 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 ARL14Q8N4G2 192 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 SPICQ8N5J4 248 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF454Q8N9F8 522 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 EXD3Q8N9H8 876 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 LRRC75AQ8NAA5 344 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 SMRP1Q8NCR6 262 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 OR4N2Q8NGD1 307 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 OR5H6Q8NGV6 325 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 OR4C3Q8NH37 302 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 C1orf216Q8TAB5 229 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 C17orf50Q8WW18 174 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 GIMAP1Q8WWP7 306 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 DACT3Q96B18 629 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 NXPE2Q96DL1 559 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 ADAM19Q9H013 955 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 PLSCR3Q9NRY6 295 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 TAS2R10Q9NYW0 307 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 LRIT1Q9P2V4 623 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 CKLFQ9UBR5 152 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 FBXL4Q9UKA2 621 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 MRPS7Q9Y2R9 242 aaKnown RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 AK6Q9Y3D8 172 aaKnown RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 ADAM18Q9Y3Q7 739 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 NPTNQ9Y639 398 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 PRRC2BQ5JSZ5 2229 aaKnown RBP8.06□□□□□ -1.12
HDAC3-202ENST00000459727 NINQ8N4C6 2090 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 DOCK8Q8NF50 2099 aa8.06□□□□□ -1.12
HDAC3-202ENST00000459727 TRAV6A0A075B6T7 132 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 TRBV5-7A0A0A0MS05 114 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ANKRD20A5PA0PJZ0 165 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 UBE2QL1A1L167 161 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 MEGF11A6BM72 1044 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 EPOPA6NHQ4 379 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 NPIPB13A6NJU9 1138 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ALG1L2C9J202 215 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 NPIPB4C9JG80 1138 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 BLOC1S5-TXNDC5H3BN57 136 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 SULT1C2O00338 296 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ZNF593O00488 134 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 GPR171O14626 319 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 HCRTR1O43613 425 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 LANCL1O43813 399 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 OR2T1O43869 369 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 CREBL2O60519 120 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ADAM11O75078 769 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 SERPINI2O75830 405 aa8.05□□□□□ -1.12
HDAC3-202ENST00000459727 ZFPL1O95159 310 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms