RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 HOXB4P17483 251 aaPredicted RBP15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 CDH2P19022 906 aaPredicted RBP15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 CDH11P55287 796 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 TAS2R41P59536 307 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 UBE2NP61088 152 aaKnown RBP15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 PUDPQ08623 228 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 Q5PR19 223 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 SLC22A25Q6T423 547 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 HIST3H2AQ7L7L0 130 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 CARM1Q86X55 608 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 MICU2Q8IYU8 434 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 PIAS4Q8N2W9 510 aaPredicted RBP15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 KDM8Q8N371 416 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 POU5F2Q8N7G0 328 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 SMAP2Q8WU79 429 aaPredicted RBP15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 HIST1H2ACQ93077 130 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 GTPBP3Q969Y2 492 aaKnown RBP15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 BOD1Q96IK1 185 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 ELAC2Q9BQ52 826 aaKnown RBP15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 WFDC6Q9BQY6 131 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 ALG2Q9H553 416 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 FKRPQ9H9S5 495 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 CISD1Q9NZ45 108 aaKnown RBP15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 SLC7A7Q9UM01 511 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 LAMP3Q9UQV4 416 aa15.38■□□□□ 0.05
SCARNA2-201ENST00000458748 ZNF726A6NNF4 738 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 M0R1B8 84 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 GSTA4O15217 222 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 BGLAPP02818 100 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 CBLP22681 906 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 AHCYP23526 432 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 CD40P25942 277 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 KDELR2P33947 212 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 NPTX1Q15818 432 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 LRRC23Q53EV4 343 aaPredicted RBP15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 ANKRD16Q6P6B7 361 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 PXKQ7Z7A4 578 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 KBTBD8Q8NFY9 601 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 OR1K1Q8NGR3 316 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 OR5J2Q8NH18 312 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 LILRB1Q8NHL6 650 aaPredicted RBP15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 TRMT61AQ96FX7 289 aaKnown RBP15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 PERPQ96FX8 193 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 ALKBH3Q96Q83 286 aaPredicted RBP15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 NANSQ9NR45 359 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 ZNF701Q9NV72 531 aaPredicted RBP15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 NPAP1Q9NZP6 1156 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 B3GAT1Q9P2W7 334 aa15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 ZNF469Q96JG9 3925 aaPredicted RBP15.37■□□□□ 0.05
SCARNA2-201ENST00000458748 A0A1W2PR80 420 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 RPL36A-HNRNPH2H7BZ11 118 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 OR5F1O95221 314 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 ADORA3P0DMS8 318 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 THRBP10828 461 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 RBM34P42696 430 aaKnown RBP15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 PTH2RP49190 550 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 FOXG1P55316 489 aaPredicted RBP15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 ROR2Q01974 943 aaKnown RBP15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 POU3F1Q03052 451 aaPredicted RBP15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 CYBRD1Q53TN4 286 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 AGAP6Q5VW22 663 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 HACD2Q6Y1H2 254 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 DEF8Q6ZN54 512 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 LSRQ86X29 649 aaPredicted RBP15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 RBM45Q8IUH3 476 aaKnown RBP15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 CCDC36Q8IYA8 594 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 MAGEE2Q8TD90 523 aaPredicted RBP15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 C18orf12Q96KH6 178 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 KCNS3Q9BQ31 491 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 FAM107BQ9H098 131 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 SEC14L4Q9UDX3 406 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 ZNF229Q9UJW7 825 aa15.36■□□□□ 0.05
SCARNA2-201ENST00000458748 NIPBLQ6KC79 2804 aaeCLIP15.36■□□□□ 0.05not detected■■□□□ 11.7
SCARNA2-201ENST00000458748 GMNCA6NCL1 334 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 MS4A18H0YCH9 400 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 PLPP3O14495 311 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 TRAF3IP2O43734 574 aaPredicted RBP15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 UPK3AO75631 287 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 ZNF432O94892 652 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 UMPSP11172 480 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 PRDX6P30041 224 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 NUDT2P50583 147 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 CRYBA2P53672 197 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 SELENOWP63302 87 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 LIPEQ05469 1076 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 ETFDHQ16134 617 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 ZNF74Q16587 644 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 MS4A18Q3C1V0 323 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 TBRG1Q3YBR2 411 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 HIKESHIQ53FT3 197 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 YTHDF3Q7Z739 585 aaKnown RBP15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 BIVMQ86UB2 503 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 WDR31Q8NA23 367 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 OR4D11Q8NGI4 311 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 TPD52L3Q96J77 140 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 LRR1Q96L50 414 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 ADAD1Q96M93 576 aaKnown RBP15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 HS6ST2Q96MM7 605 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 MOGAT1Q96PD6 335 aa15.35■□□□□ 0.05
SCARNA2-201ENST00000458748 OR2M2Q96R28 347 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms