RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 H1FNTQ75WM6 255 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-220ENST00000458038 ZNF786Q8N393 782 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 LSMEM1Q8N8F7 131 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 DNAJA4Q8WW22 397 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-220ENST00000458038 SLC38A4Q969I6 547 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 A4GALTQ9NPC4 353 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 USP22Q9UPT9 525 aa18.65■□□□□ 0.58
CPNE1-220ENST00000458038 IGHV2OR16-5A0A0B4J2B6 119 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 ZNF99A8MXY4 864 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-220ENST00000458038 ETS2P15036 469 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 PCMT1P22061 227 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 POLR2JP52435 117 aaKnown RBP18.64■□□□□ 0.57
CPNE1-220ENST00000458038 RGNQ15493 299 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 CR1LQ2VPA4 569 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 RPS26P11Q5JNZ5 115 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-220ENST00000458038 IL17RELQ6ZVW7 336 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 SPATA21Q7Z572 469 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 KDM8Q8N371 416 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 RFLNBQ8N5W9 214 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 ADPRHL1Q8NDY3 354 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 BBS10Q8TAM1 723 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 KTI12Q96EK9 354 aaPredicted RBP18.64■□□□□ 0.57
CPNE1-220ENST00000458038 CRLF2Q9HC73 371 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 B3GAT1Q9P2W7 334 aa18.64■□□□□ 0.57
CPNE1-220ENST00000458038 KITP10721 976 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 BMP2P12643 396 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 EVX1P49640 407 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 CEACAM16Q2WEN9 425 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 C6orf10Q5SRN2 563 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 LINC01356Q8N9X3 169 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 OR6S1Q8NH40 331 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 UBASH3BQ8TF42 649 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 LRR1Q96L50 414 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 DYNLRB1Q9NP97 96 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 CMAHPQ9Y471 501 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 SPEF1Q9Y4P9 236 aa18.63■□□□□ 0.57
CPNE1-220ENST00000458038 TRAV36DV7A0A075B6V5 113 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 TMEM129A0AVI4 362 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 C5orf58C9J3I9 102 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 HAX1O00165 279 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 CLIC1O00299 241 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 UBDO15205 165 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 C8BP07358 591 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 PRKAR1BP31321 381 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 SLC18A1P54219 525 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 DAG1Q14118 895 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 ADRM1Q16186 407 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 LSRQ86X29 649 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-220ENST00000458038 SNX32Q86XE0 403 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 SVOPLQ8N434 492 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 ANKRD42Q8N9B4 389 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 CKAP2Q8WWK9 683 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 TAAR8Q969N4 342 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 OR2M2Q96R28 347 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 PARD6BQ9BYG5 372 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 DENND2DQ9H6A0 471 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-220ENST00000458038 SEC61A2Q9H9S3 476 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 TMEFF2Q9UIK5 374 aaPredicted RBP18.62■□□□□ 0.57
CPNE1-220ENST00000458038 CORINQ9Y5Q5 1042 aa18.62■□□□□ 0.57
CPNE1-220ENST00000458038 ANK2Q01484 3957 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 M0R082 166 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 LILRA1O75019 489 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 CELA3BP08861 270 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 NR4A1P22736 598 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 APEX1P27695 318 aaKnown RBP18.61■□□□□ 0.57
CPNE1-220ENST00000458038 WDR4P57081 412 aaKnown RBP18.61■□□□□ 0.57
CPNE1-220ENST00000458038 NPRL3Q12980 569 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 RIN1Q13671 783 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 FAM91A1Q658Y4 838 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 ULK3Q6PHR2 472 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 MDP1Q86V88 176 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 KRT73Q86Y46 540 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 TMEM123Q8N131 208 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 MIER2Q8N344 545 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 ZNF417Q8TAU3 575 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 GTF2H4Q92759 462 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 VPS33AQ96AX1 596 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 C1orf159Q96HA4 380 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 ZNF587Q96SQ5 575 aaPredicted RBP18.61■□□□□ 0.57
CPNE1-220ENST00000458038 EPYCQ99645 322 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 SPATA5L1Q9BVQ7 753 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 MS4A5Q9H3V2 200 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 B3GAT2Q9NPZ5 323 aa18.61■□□□□ 0.57
CPNE1-220ENST00000458038 LRP5LA4QPB2 252 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 TCF21O43680 179 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 IFNGR1P15260 489 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 GRPRP30550 384 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 CAPZA2P47755 286 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 HOXC5Q00444 222 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 IL1RL1Q01638 556 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 SNTB2Q13425 540 aaKnown RBP18.6■□□□□ 0.57
CPNE1-220ENST00000458038 GTDC1Q4AE62 458 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 SLC9B1Q4ZJI4 515 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 ZNF627Q7L945 461 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 MYPOPQ86VE0 399 aaPredicted RBP18.6■□□□□ 0.57
CPNE1-220ENST00000458038 UEVLDQ8IX04 471 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 SCAIQ8N9R8 606 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 SLC47A1Q96FL8 570 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 SOX7Q9BT81 388 aa18.6■□□□□ 0.57
CPNE1-220ENST00000458038 PAIP1Q9H074 479 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms