RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 NECTIN4Q96NY8 510 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 ATOH8Q96SQ7 321 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 GMLQ99445 158 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 PDLIM7Q9NR12 457 aa18.22■□□□□ 0.51
SNX27-204ENST00000458013 D6RAR5 112 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 HTR2CP28335 458 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 HOXA9P31269 272 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 SPNS2Q8IVW8 549 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 WSB2Q9NYS7 404 aaPredicted RBP18.21■□□□□ 0.51
SNX27-204ENST00000458013 SNX11Q9Y5W9 270 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 OR6C76A6NM76 312 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 GFRA2O00451 464 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 NPY4RP50391 375 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 CLDN10P78369 228 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 FAM174AQ8TBP5 190 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 ARPC5LQ9BPX5 153 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 UGT2A1Q9Y4X1 527 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 TK1P04183 234 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 PKLRP30613 574 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 AGFG1P52594 562 aaKnown RBP18.21■□□□□ 0.51
SNX27-204ENST00000458013 FRMPD2BQ6IN97 320 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 SEC22CQ9BRL7 303 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 CGGBP1Q9UFW8 167 aaPredicted RBP18.21■□□□□ 0.51
SNX27-204ENST00000458013 ADRA1AP35348 466 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 OPRD1P41143 372 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 ELLP55199 621 aaPredicted RBP18.21■□□□□ 0.51
SNX27-204ENST00000458013 BANF2Q9H503 90 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 CXorf36Q9H7Y0 433 aa18.21■□□□□ 0.51
SNX27-204ENST00000458013 SLC22A23A1A5C7 686 aa18.21■□□□□ 0.5
SNX27-204ENST00000458013 FABP7O15540 132 aa18.21■□□□□ 0.5
SNX27-204ENST00000458013 CXCL12P48061 93 aa18.21■□□□□ 0.5
SNX27-204ENST00000458013 NLRP8Q86W28 1048 aa18.21■□□□□ 0.5
SNX27-204ENST00000458013 SLC39A11Q8N1S5 342 aa18.21■□□□□ 0.5
SNX27-204ENST00000458013 SMAP2Q8WU79 429 aaPredicted RBP18.21■□□□□ 0.5
SNX27-204ENST00000458013 ZFP57Q9NU63 452 aa18.21■□□□□ 0.5
SNX27-204ENST00000458013 TSTD3H0UI37 97 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 OR10J4P0C629 311 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 SIAH3Q8IW03 269 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 CBARPQ8N350 705 aaPredicted RBP18.2■□□□□ 0.5
SNX27-204ENST00000458013 OR5H6Q8NGV6 325 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 NKX3-1Q99801 234 aaPredicted RBP18.2■□□□□ 0.5
SNX27-204ENST00000458013 GNG12Q9UBI6 72 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 A6NHS1 94 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 OR2T1O43869 369 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 GPR75O95800 540 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 LIN7BQ9HAP6 207 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 AAED1Q7RTV5 226 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 CPPED1Q9BRF8 314 aaPredicted RBP18.2■□□□□ 0.5
SNX27-204ENST00000458013 SCML1Q9UN30 329 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 PIGLQ9Y2B2 252 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 C17orf113A0A1B0GUU1 675 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 ZNF74Q16587 644 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 ABHD4Q8TB40 342 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 TMED7-TICAM2A0A0A6YYA0 188 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 ALPLP05186 524 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 HOXD11P31277 338 aaPredicted RBP18.2■□□□□ 0.5
SNX27-204ENST00000458013 MFGE8Q08431 387 aaPredicted RBP18.2■□□□□ 0.5
SNX27-204ENST00000458013 DBPQ10586 325 aaPredicted RBP18.2■□□□□ 0.5
SNX27-204ENST00000458013 PLAC9Q5JTB6 97 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 ZNF534Q76KX8 674 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 NECAP1Q8NC96 275 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 TMED7Q9Y3B3 224 aa18.2■□□□□ 0.5
SNX27-204ENST00000458013 ZNF468Q5VIY5 522 aaPredicted RBP18.19■□□□□ 0.5
SNX27-204ENST00000458013 TMEM59Q9BXS4 323 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 RAB38P57729 211 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 ERVFC1P60507 584 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 SFXN4Q6P4A7 337 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 RBM45Q8IUH3 476 aaKnown RBP18.19■□□□□ 0.5
SNX27-204ENST00000458013 ZNF511Q8NB15 262 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 OR4Q3Q8NH05 313 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 ARRDC2Q8TBH0 407 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 LUZP4Q9P127 313 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 ZFP92A6NM28 416 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 MCRIP1C9JLW8 97 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 GLSO94925 669 aaPredicted RBP18.19■□□□□ 0.5
SNX27-204ENST00000458013 INHBCP55103 352 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 TAS2R46P59540 309 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 MPEG1Q2M385 716 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 OR8G2PQ6IF36 304 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 ADIPOR2Q86V24 386 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 LSMEM2Q8N112 164 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 C20orf85Q9H1P6 137 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 ERVMER34-1Q9H9K5 563 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 SETD1AO15047 1707 aaKnown RBP18.19■□□□□ 0.5
SNX27-204ENST00000458013 NPC1O15118 1278 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 TAPBPO15533 448 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 APOA2P02652 100 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 ZNF169Q14929 603 aaPredicted RBP18.19■□□□□ 0.5
SNX27-204ENST00000458013 Q6ZTK2 550 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 OR10K1Q8NGX5 313 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 C1orf198Q9H425 327 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 C1orf123Q9NWV4 160 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 PCYT1BQ9Y5K3 369 aaPredicted RBP18.19■□□□□ 0.5
SNX27-204ENST00000458013 IMPA1P29218 277 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 OR4N2Q8NGD1 307 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 ZNF75AQ96N20 296 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 SLC6A18Q96N87 628 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 DHRS4Q9BTZ2 278 aa18.19■□□□□ 0.5
SNX27-204ENST00000458013 AMBRA1Q9C0C7 1298 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms