RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 EDNRAP25101 427 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 GDF1P27539 372 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 SLC6A6P31641 620 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 PYCR1P32322 319 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 NTF4P34130 210 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 IDUAP35475 653 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 HCCSP53701 268 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 RRADP55042 308 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 GABARAPL2P60520 117 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 TEKQ02763 1124 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 LGALS3BPQ08380 585 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 SELENBP1Q13228 472 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 NEDD8Q15843 81 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 SGCBQ16585 318 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 CRTC2Q53ET0 693 aaPredicted RBP7.82□□□□□ -1.16
RIF1-208ENST00000457745 ALG10Q5BKT4 473 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 ZNF766Q5HY98 468 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 FAM69AQ5T7M9 428 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 LINC01590Q5TEZ4 76 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 AGAP7PQ5VUJ5 663 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 GTF2IRD2BQ6EKJ0 949 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 CASP12Q6UXS9 341 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 KCTD8Q6ZWB6 473 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 CXXC5Q7LFL8 322 aaKnown RBP7.82□□□□□ -1.16
RIF1-208ENST00000457745 GTF2IRD2Q86UP8 949 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 DEPDC4Q8N2C3 294 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 ZNF248Q8NDW4 579 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 OR4F15Q8NGB8 312 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 OR52I1Q8NGK6 324 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 OR8J1Q8NGP2 316 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 OR5J2Q8NH18 312 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 MFSD8Q8NHS3 518 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 HAS2Q92819 552 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 ZBTB8AQ96BR9 441 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 ITPKCQ96DU7 683 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 ZNF845Q96IR2 970 aaPredicted RBP7.82□□□□□ -1.16
RIF1-208ENST00000457745 FOXN4Q96NZ1 517 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 AGAP4Q96P64 663 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 OR5B2Q96R09 309 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 MRPS26Q9BYN8 205 aaKnown RBP7.82□□□□□ -1.16
RIF1-208ENST00000457745 POTEKPQ9BYX7 375 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 CHST11Q9NPF2 352 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 NANSQ9NR45 359 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 MED29Q9NX70 200 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 SPRR3Q9UBC9 169 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 LSM2Q9Y333 95 aaKnown RBP7.82□□□□□ -1.16
RIF1-208ENST00000457745 URB1O60287 2271 aaKnown RBP7.82□□□□□ -1.16
RIF1-208ENST00000457745 PIEZO1Q92508 2521 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 DNAJC13O75165 2243 aa7.82□□□□□ -1.16
RIF1-208ENST00000457745 ZFHX4Q86UP3 3567 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 A0A087WZY1 265 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 J3QRE1 110 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ARPC3O15145 178 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 SMAD9O15198 467 aaKnown RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 MAGEB4O15481 346 aaPredicted RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 SEC14L5O43304 696 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 TRAF3IP2O43734 574 aaPredicted RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 TXNDC12O95881 172 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 WNT11O96014 354 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 HPNP05981 417 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 CDK1P06493 297 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 CD14P08571 375 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ADRB1P08588 477 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 MRPL3P09001 348 aaKnown RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 ADORA3P0DMS8 318 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ENPP1P22413 925 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ACVR2AP27037 513 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 RPL4P36578 427 aaKnown RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 HTR3AP46098 478 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 DIO1P49895 249 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ETV1P50549 477 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 OR2B6P58173 313 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 CXCR4P61073 352 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ARG2P78540 354 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 EMX1Q04741 257 aaPredicted RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 FMODQ06828 376 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 KRR1Q13601 381 aaKnown RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 TOMM20Q15388 145 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ETFDHQ16134 617 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ACKR1Q16570 336 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 PHYHD1Q5SRE7 291 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 SLC25A30Q5SVS4 291 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ARMC4Q5T2S8 1044 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 C3orf33Q6P1S2 294 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 DPY19L2P2Q6ZN68 376 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 SSX6Q7RTT6 188 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 MAMDC2Q7Z304 686 aaPredicted RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 CDK20Q8IZL9 346 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 RBMXL3Q8N7X1 1067 aaKnown RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 ZFP62Q8NB50 900 aaPredicted RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 OR52L1Q8NGH7 329 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 OR14L1PQ8NHC6 308 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 HTRA1Q92743 480 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 MUL1Q969V5 352 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 OR5M11Q96RB7 305 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 TAAR6Q96RI8 345 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 SMAD5Q99717 465 aaKnown RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 EMC6Q9BV81 110 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 YTHDF1Q9BYJ9 559 aaKnown RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 TTTY10Q9BZA0 68 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms