RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 RPS6KA6Q9UK32 745 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 MGAT4BQ9UQ53 548 aa20.39■□□□□ 0.85
CBX3-204ENST00000456948 A0A1W2PPR1 153 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 HTR3EA5X5Y0 456 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 CLOCKO15516 846 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 CH25HO95992 272 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 ADORA3P0DMS8 318 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 UMPSP11172 480 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 C9orf135Q5VTT2 229 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 GEMIN6Q8WXD5 167 aaKnown RBP20.38■□□□□ 0.85
CBX3-204ENST00000456948 MOGAT1Q96PD6 335 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 CCT8L2Q96SF2 557 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 CCL19Q99731 98 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 PIP5K1AQ99755 562 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 TMEM204Q9BSN7 226 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 MOV10Q9HCE1 1003 aaKnown RBP20.38■□□□□ 0.85
CBX3-204ENST00000456948 OBP2BQ9NPH6 170 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 B3GAT2Q9NPZ5 323 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 B3GAT1Q9P2W7 334 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 SEC14L4Q9UDX3 406 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 ZNF229Q9UJW7 825 aa20.38■□□□□ 0.85
CBX3-204ENST00000456948 PRR14LQ5THK1 2151 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 CELSR1Q9NYQ6 3014 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 MS4A18H0YCH9 400 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 PLPP3O14495 311 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 TMCC2O75069 709 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 CDH2P19022 906 aaPredicted RBP20.37■□□□□ 0.85
CBX3-204ENST00000456948 TNFRSF1BP20333 461 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 PTAFRP25105 342 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 LOXP28300 417 aaPredicted RBP20.37■□□□□ 0.85
CBX3-204ENST00000456948 MXRA7P84157 204 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 POU3F1Q03052 451 aaPredicted RBP20.37■□□□□ 0.85
CBX3-204ENST00000456948 PIN1Q13526 163 aaPredicted RBP20.37■□□□□ 0.85
CBX3-204ENST00000456948 TESK1Q15569 626 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 ZNF74Q16587 644 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 MS4A18Q3C1V0 323 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 IFI44LQ53G44 452 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 CBLL1Q75N03 491 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 ZNF426Q9BUY5 554 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 AMBRA1Q9C0C7 1298 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 MED31Q9Y3C7 131 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 ROS1P08922 2347 aa20.37■□□□□ 0.85
CBX3-204ENST00000456948 HRNRQ86YZ3 2850 aaPredicted RBP20.36■□□□□ 0.85
CBX3-204ENST00000456948 KPNA4O00629 521 aaPredicted RBP20.36■□□□□ 0.85
CBX3-204ENST00000456948 HS3ST1O14792 307 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 SMPD2O60906 423 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 SERPINA1P01009 418 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 IGF2P01344 180 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 MT-ND1P03886 318 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 CD53P19397 219 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 PTNP21246 168 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 UBE2NP61088 152 aaKnown RBP20.36■□□□□ 0.85
CBX3-204ENST00000456948 LTBQ06643 244 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 BSPH1Q075Z2 132 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 ADAM5Q6NVV9 412 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 C16orf89Q6UX73 402 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 CYP4Z1Q86W10 505 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 TMEM239Q8WW34 195 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 AKAP1Q92667 903 aaKnown RBP eCLIP20.36■□□□□ 0.85
CBX3-204ENST00000456948 PRRC1Q96M27 445 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 FNDC11Q9BVV2 318 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 CXXC4Q9H2H0 198 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 SLC17A5Q9NRA2 495 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 SLC25A15Q9Y619 301 aa20.36■□□□□ 0.85
CBX3-204ENST00000456948 ARHGEF9O43307 516 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 RNF13O43567 381 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 SHOX2O60902 331 aaPredicted RBP20.35■□□□□ 0.85
CBX3-204ENST00000456948 ZNF432O94892 652 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 LYPD3O95274 346 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 FAM107AO95990 144 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 THY1P04216 161 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 HOXB1P14653 301 aaPredicted RBP20.35■□□□□ 0.85
CBX3-204ENST00000456948 ROR2Q01974 943 aaKnown RBP20.35■□□□□ 0.85
CBX3-204ENST00000456948 WDR88Q6ZMY6 472 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 LSRQ86X29 649 aaPredicted RBP20.35■□□□□ 0.85
CBX3-204ENST00000456948 ZNF611Q8N823 705 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 TMEM171Q8WVE6 324 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 BOD1Q96IK1 185 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 LRR1Q96L50 414 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 ADAD1Q96M93 576 aaKnown RBP20.35■□□□□ 0.85
CBX3-204ENST00000456948 ALKBH3Q96Q83 286 aaPredicted RBP20.35■□□□□ 0.85
CBX3-204ENST00000456948 PRSS27Q9BQR3 290 aa20.35■□□□□ 0.85
CBX3-204ENST00000456948 TEP1Q99973 2627 aaKnown RBP20.35■□□□□ 0.85
CBX3-204ENST00000456948 DSCAMO60469 2012 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 DPRXA6NFQ7 191 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 LRRN3E7EW58 273 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 RPL36A-HNRNPH2H7BZ11 118 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 TRAF3IP2O43734 574 aaPredicted RBP20.34■□□□□ 0.85
CBX3-204ENST00000456948 UPK3AO75631 287 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 ZP4Q12836 540 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 SAMD4BQ5PRF9 694 aaKnown RBP20.34■□□□□ 0.85
CBX3-204ENST00000456948 GLYATQ6IB77 296 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 ANKRD16Q6P6B7 361 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 NANOGNBQ7Z5D8 188 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 PGAM4Q8N0Y7 254 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 CCDC197Q8NCU1 140 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 FBXW5Q969U6 566 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 SGTBQ96EQ0 304 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 OR2M2Q96R28 347 aa20.34■□□□□ 0.85
CBX3-204ENST00000456948 CXorf56Q9H5V9 222 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms