RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 VKORC1Q9BQB6 163 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 TACO1Q9BSH4 297 aaKnown RBP12.6□□□□□ -0.39
LINC00887-204ENST00000456816 IFT27Q9BW83 186 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 SF3B5Q9BWJ5 86 aaKnown RBP12.6□□□□□ -0.39
LINC00887-204ENST00000456816 OSBPL10Q9BXB5 764 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 VCXQ9H320 206 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 OR52D1Q9H346 318 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 EGLN3Q9H6Z9 239 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 RNF122Q9H9V4 155 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 GLRX2Q9NS18 164 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 TAS2R5Q9NYW4 299 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 IL20RAQ9UHF4 553 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 SIGLEC7Q9Y286 467 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 HIF3AQ9Y2N7 669 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 MEMO1Q9Y316 297 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 EMC9Q9Y3B6 208 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 CDH10Q9Y6N8 788 aa12.6□□□□□ -0.39
LINC00887-204ENST00000456816 A0A1W2PNV4 684 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 MBD3L4A6NDZ8 208 aaPredicted RBP12.59□□□□□ -0.39
LINC00887-204ENST00000456816 MBD3L3A6NE82 208 aaPredicted RBP12.59□□□□□ -0.39
LINC00887-204ENST00000456816 MBD3L5A6NJ08 208 aaPredicted RBP12.59□□□□□ -0.39
LINC00887-204ENST00000456816 MS4A18H0YCH9 400 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 SOCS2O14508 198 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 AKAP8O43823 692 aaKnown RBP12.59□□□□□ -0.39
LINC00887-204ENST00000456816 FZD7O75084 574 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 HPRP00739 348 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 CDH2P19022 906 aaPredicted RBP12.59□□□□□ -0.39
LINC00887-204ENST00000456816 SLC6A6P31641 620 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 TIMP3P35625 211 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 P2RY4P51582 365 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 CTXN1P60606 82 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 RPS4XP62701 263 aaKnown RBP12.59□□□□□ -0.39
LINC00887-204ENST00000456816 ZP4Q12836 540 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 SLC17A1Q14916 467 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 MS4A18Q3C1V0 323 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 CLEC12AQ5QGZ9 265 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 PXKQ7Z7A4 578 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 TUSC5Q8IXB3 177 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 GALNT4Q8N4A0 578 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 MBD3L2Q8NHZ7 208 aaPredicted RBP12.59□□□□□ -0.39
LINC00887-204ENST00000456816 RND1Q92730 232 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 SAMD8Q96LT4 415 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 ZFP3Q96NJ6 502 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 POLDIP3Q9BY77 421 aaKnown RBP12.59□□□□□ -0.39
LINC00887-204ENST00000456816 RIBC2Q9H4K1 309 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 ENOPH1Q9UHY7 261 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 NOSIPQ9Y314 301 aaKnown RBP12.59□□□□□ -0.39
LINC00887-204ENST00000456816 SHANK1Q9Y566 2161 aa12.59□□□□□ -0.39
LINC00887-204ENST00000456816 KALRNO60229 2985 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 ZNF716A6NP11 495 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 HSPB2A8KAH6 182 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 LRRTM2O43300 516 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 MITFO75030 526 aaPredicted RBP12.58□□□□□ -0.4
LINC00887-204ENST00000456816 PTP4A3O75365 173 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 BCL10O95999 233 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 YES1P07947 543 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 OSMP13725 252 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 HLA-DOBP13765 273 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 IFNGR1P15260 489 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 NOS3P29474 1203 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 DAP3P51398 398 aaKnown RBP12.58□□□□□ -0.4
LINC00887-204ENST00000456816 ALDH3A2P51648 485 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 RAD23AP54725 363 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 CLDN17P56750 224 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 ERVK-25P63136 954 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 PDK3Q15120 406 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 HSPB2Q16082 182 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 SLC36A3Q495N2 470 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 RIPPLY2Q5TAB7 128 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 CASP12Q6UXS9 341 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 CD300LDQ6UXZ3 194 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 NCCRP1Q6ZVX7 275 aaPredicted RBP12.58□□□□□ -0.4
LINC00887-204ENST00000456816 SLC35D2Q76EJ3 337 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 KIF18BQ86Y91 864 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 KATNB1Q9BVA0 655 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 TSSK6Q9BXA6 273 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 VCX3BQ9H321 246 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 B3GAT1Q9P2W7 334 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 FLVCR1Q9Y5Y0 555 aa12.58□□□□□ -0.4
LINC00887-204ENST00000456816 ZNF726A6NNF4 738 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 ZNF724A8MTY0 619 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 PYCARD-AS1I3L0S3 204 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 SS18L1O75177 396 aaPredicted RBP12.57□□□□□ -0.4
LINC00887-204ENST00000456816 MRPL33O75394 65 aaKnown RBP12.57□□□□□ -0.4
LINC00887-204ENST00000456816 PPP1R3DO95685 299 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 IGFBP1P08833 259 aaPredicted RBP12.57□□□□□ -0.4
LINC00887-204ENST00000456816 AGTR1P30556 359 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 RPS6KA3P51812 740 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 SLC16A1P53985 500 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 PPP2R2BQ00005 443 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 MELKQ14680 651 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 POU4F3Q15319 338 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 RFX4Q33E94 735 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 C4orf17Q53FE4 359 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 CARD17Q5XLA6 110 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 FBXW10Q5XX13 1052 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 KDM4DQ6B0I6 523 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 MTFR2Q6P444 385 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 NIPAL3Q6P499 406 aa12.57□□□□□ -0.4
LINC00887-204ENST00000456816 THSD4Q6ZMP0 1018 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms