RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CELSR3Q9NYQ7 3312 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 LINC00862A6NCI5 91 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 SLC22A31A6NKX4 558 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 PIN1P1O15428 100 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 UCHL1P09936 223 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 TMIGD3P0DMS9 266 aaPredicted RBP11.34□□□□□ -0.59
LINC00959-201ENST00000456581 NID1P14543 1247 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 RAD52P43351 418 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 OR1D4P47884 311 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 AP2S1P53680 142 aaPredicted RBP11.34□□□□□ -0.59
LINC00959-201ENST00000456581 GRK1Q15835 563 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 C2orf68Q2NKX9 166 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 GPR139Q6DWJ6 353 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 GKN2Q86XP6 184 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 NMNAT3Q96T66 252 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 MED31Q9Y3C7 131 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 IER3IP1Q9Y5U9 82 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 RNF215Q9Y6U7 377 aa11.34□□□□□ -0.59
LINC00959-201ENST00000456581 TRBV2A0A0J9YWF9 115 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 A0A1B0GWA3 101 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 TRIM77I1YAP6 450 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 RPP14O95059 124 aaKnown RBP11.33□□□□□ -0.6
LINC00959-201ENST00000456581 ALDOBP05062 364 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 ATF4P18848 351 aaPredicted RBP11.33□□□□□ -0.6
LINC00959-201ENST00000456581 ANXA7P20073 488 aaKnown RBP11.33□□□□□ -0.6
LINC00959-201ENST00000456581 MAP3K8P41279 467 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 GABRA4P48169 554 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 FNTBP49356 437 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 BDH1Q02338 343 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 CFHR1Q03591 330 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 KLF9Q13886 244 aaPredicted RBP11.33□□□□□ -0.6
LINC00959-201ENST00000456581 TMEM44Q2T9K0 475 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 SLC25A25Q6KCM7 469 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 LUZP2Q86TE4 346 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 TMEM151BQ8IW70 566 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 IQCF2Q8IXL9 164 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 RASD2Q96D21 266 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 RBM18Q96H35 190 aaKnown RBP11.33□□□□□ -0.6
LINC00959-201ENST00000456581 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 EMC7Q9NPA0 242 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 DHCR7Q9UBM7 475 aaKnown RBP11.33□□□□□ -0.6
LINC00959-201ENST00000456581 SLC35A3Q9Y2D2 325 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 GPR179Q6PRD1 2367 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 BDP1A6H8Y1 2624 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 A0A087WV62 115 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 ARPC1BO15143 372 aaKnown RBP11.33□□□□□ -0.6
LINC00959-201ENST00000456581 FLRT2O43155 660 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 GMFGO60234 142 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 UBL3O95164 117 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 SLC35E2P0CK97 266 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 ZNF3P17036 446 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 CXCL2P19875 107 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 EDNRAP25101 427 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 NRG3P56975 720 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 NXPH1P58417 271 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 BTN1A1Q13410 526 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 EXOSC6Q5RKV6 272 aaKnown RBP11.33□□□□□ -0.6
LINC00959-201ENST00000456581 MANEAQ5SRI9 462 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 IDO2Q6ZQW0 420 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 FCRLAQ7L513 359 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 PRSS58Q8IYP2 241 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 LSMEM1Q8N8F7 131 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 ZNF321PQ8N8H1 164 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 HAVCR2Q8TDQ0 301 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 TTC9Q92623 222 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 WBP1Q96G27 269 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 OR1F2PQ96R84 312 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 CDX2Q99626 313 aaPredicted RBP11.33□□□□□ -0.6
LINC00959-201ENST00000456581 FSCN3Q9NQT6 498 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 NANSQ9NR45 359 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 DUSP22Q9NRW4 184 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 LRIT1Q9P2V4 623 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 ERVK-19Q9WJR5 959 aa11.33□□□□□ -0.6
LINC00959-201ENST00000456581 SMAD9O15198 467 aaKnown RBP11.32□□□□□ -0.6
LINC00959-201ENST00000456581 PTP4A3O75365 173 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 DBIP07108 87 aaKnown RBP11.32□□□□□ -0.6
LINC00959-201ENST00000456581 SULT1A3P0DMM9 295 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 SULT1A4P0DMN0 295 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 GAAP10253 952 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
LINC00959-201ENST00000456581 DCTDP32321 178 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 NANOS3P60323 173 aaKnown RBP11.32□□□□□ -0.6
LINC00959-201ENST00000456581 CD276Q5ZPR3 534 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 NPSR1Q6W5P4 371 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 ZNF782Q6ZMW2 699 aaPredicted RBP11.32□□□□□ -0.6
LINC00959-201ENST00000456581 STPG2Q8N412 459 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 RCBTB1Q8NDN9 531 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 OR8K3Q8NH51 312 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 SNX33Q8WV41 574 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 RANBP3Q9H6Z4 567 aaPredicted RBP11.32□□□□□ -0.6
LINC00959-201ENST00000456581 MEIKINA0A087WXM9 373 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 LMO7DNF2Z398 122 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 BRINP1O60477 761 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 RCBTB2O95199 551 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 IFNA16P05015 189 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 SOX2P48431 317 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 ARHGDIBP52566 201 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 BLVRAP53004 296 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 CDK5R1Q15078 307 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 EIPR1Q53HC9 387 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms