RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 PMS2P3Q13401 168 aa16.51■□□□□ 0.23
SBDSP1-205ENST00000456312 PXKQ7Z7A4 578 aa16.51■□□□□ 0.23
SBDSP1-205ENST00000456312 ZNF610Q8N9Z0 462 aa16.51■□□□□ 0.23
SBDSP1-205ENST00000456312 DENND2DQ9H6A0 471 aaPredicted RBP16.51■□□□□ 0.23
SBDSP1-205ENST00000456312 NTN4Q9HB63 628 aa16.51■□□□□ 0.23
SBDSP1-205ENST00000456312 PROCRQ9UNN8 238 aa16.51■□□□□ 0.23
SBDSP1-205ENST00000456312 CIB2O75838 187 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 CST1P01037 141 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 GPR4P46093 362 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 SLC9A3P48764 834 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 FXYD6P3P58550 94 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 RPL18Q07020 188 aaKnown RBP16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 GK3PQ14409 553 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 KPNB1Q14974 876 aaKnown RBP16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 C1orf94Q6P1W5 598 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 PGBD2Q6P3X8 592 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 NANOGNBQ7Z5D8 188 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 TMEM179BQ7Z7N9 219 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 GPAT4Q86UL3 456 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 GABRG1Q8N1C3 465 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 C10orf53Q8N6V4 93 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 FAM46AQ96IP4 442 aaKnown RBP16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 C12orf49Q9H741 205 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 KCNJ16Q9NPI9 418 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 TMEM5Q9Y2B1 443 aa16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 NOSIPQ9Y314 301 aaKnown RBP16.5■□□□□ 0.23
SBDSP1-205ENST00000456312 HECTD1Q9ULT8 2610 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 EEF1E1-BLOC1S5C9J1V9 151 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 TNFRSF11BO00300 401 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 EEF1E1O43324 174 aaKnown RBP16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 PTP4A3O75365 173 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 ADORA3P0DMS8 318 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 CCKARP32238 428 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 GSSP48637 474 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 IST1P53990 364 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 ANKDD1AQ495B1 522 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 LUZP2Q86TE4 346 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 OR13C2Q8NGS9 318 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 MOSPD2Q8NHP6 518 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 RNASE6Q93091 150 aaKnown RBP16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 RSRC1Q96IZ7 334 aaKnown RBP16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 MCCC2Q9HCC0 563 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 GALNT8Q9NY28 637 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 C6orf203Q9P0P8 240 aaPredicted RBP16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 MALT1Q9UDY8 824 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 PRSS50Q9UI38 385 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 RCE1Q9Y256 329 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 SIGLEC7Q9Y286 467 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 NOX1Q9Y5S8 564 aa16.49■□□□□ 0.23
SBDSP1-205ENST00000456312 NPIPB13A6NJU9 1138 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 EFCAB9A8MZ26 197 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 NPIPB4C9JG80 1138 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 H3BNX3 289 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 PDLIM1O00151 329 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 TIPRLO75663 272 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 SMNDC1O75940 238 aaKnown RBP eCLIP16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 CNOT4O95628 575 aaKnown RBP16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 ZNF43P17038 809 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 FPR3P25089 353 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 AQP2P41181 271 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 SELENOPP49908 381 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 POU3F1Q03052 451 aaPredicted RBP16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 TMEM123Q8N131 208 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 OR9Q2Q8NGE9 314 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 TXNDC15Q96J42 360 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 RAB3IPQ96QF0 476 aaPredicted RBP16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 ENKD1Q9H0I2 346 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 REEP1Q9H902 201 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 DNAJB9Q9UBS3 223 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 SAMHD1Q9Y3Z3 626 aaKnown RBP16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 U3KQV3 271 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 CRYBG3Q68DQ2 2970 aa16.48■□□□□ 0.23
SBDSP1-205ENST00000456312 TRAV27A0A087WT01 109 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 A1L4Q6 167 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 ARRDC5A6NEK1 342 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 C11orf98E9PRG8 122 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 MRPL33O75394 65 aaKnown RBP16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 IGHMP01871 453 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 SAGP10523 405 aaPredicted RBP16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 COX5AP20674 150 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 CLDN17P56750 224 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 LAPTM4AQ15012 233 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 MICAQ29983 383 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 HMBOX1Q6NT76 420 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 UEVLDQ8IX04 471 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 ANKK1Q8NFD2 765 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 OR2M2Q96R28 347 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 TNFRSF13CQ96RJ3 184 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 RBM24Q9BX46 236 aaKnown RBP16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 YY1AP1Q9H869 796 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 MED29Q9NX70 200 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 FOXD3Q9UJU5 478 aaPredicted RBP16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 AP4S1Q9Y587 144 aa16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 ASH1LQ9NR48 2969 aaKnown RBP16.47■□□□□ 0.23
SBDSP1-205ENST00000456312 BLOC1S5-TXNDC5H3BN57 136 aa16.46■□□□□ 0.23
SBDSP1-205ENST00000456312 CLOCKO15516 846 aa16.46■□□□□ 0.23
SBDSP1-205ENST00000456312 OR10H3O60404 316 aa16.46■□□□□ 0.23
SBDSP1-205ENST00000456312 HIST1H2ABP04908 130 aa16.46■□□□□ 0.23
SBDSP1-205ENST00000456312 DNAJA1P31689 397 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms