RNA–Protein interactions for RNA: ENST00000456128.5

TOM1-212, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 1,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-212ENST00000456128 NPAP1Q9NZP6 1156 aa13.78□□□□□ -0.2
TOM1-212ENST00000456128 NOX1Q9Y5S8 564 aa13.78□□□□□ -0.2
TOM1-212ENST00000456128 MTORP42345 2549 aa13.78□□□□□ -0.2
TOM1-212ENST00000456128 PLPP3O14495 311 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 HS3ST1O14792 307 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 GSTA4O15217 222 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 CLOCKO15516 846 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 SHOX2O60902 331 aaPredicted RBP13.77□□□□□ -0.21
TOM1-212ENST00000456128 SLC43A1O75387 559 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 THRBP10828 461 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 FLNAP21333 2647 aaKnown RBP13.77□□□□□ -0.21
TOM1-212ENST00000456128 LGALS3BPQ08380 585 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 PIN1Q13526 163 aaPredicted RBP13.77□□□□□ -0.21
TOM1-212ENST00000456128 ZNF74Q16587 644 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 ZNF611Q8N823 705 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 WDR31Q8NA23 367 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 ANKK1Q8NFD2 765 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
TOM1-212ENST00000456128 ALKBH3Q96Q83 286 aaPredicted RBP13.77□□□□□ -0.21
TOM1-212ENST00000456128 LRRC37BQ96QE4 947 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 OR2M2Q96R28 347 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 KCTD14Q9BQ13 255 aaPredicted RBP13.77□□□□□ -0.21
TOM1-212ENST00000456128 FKRPQ9H9S5 495 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 SPAG4Q9NPE6 437 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 NANSQ9NR45 359 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 SLC17A5Q9NRA2 495 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 RIMS3Q9UJD0 308 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 AMDHD2Q9Y303 409 aa13.77□□□□□ -0.21
TOM1-212ENST00000456128 A0A1W2PR80 420 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 KPNA4O00629 521 aaPredicted RBP13.76□□□□□ -0.21
TOM1-212ENST00000456128 UPK3AO75631 287 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 DCTN3O75935 186 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 CH25HO95992 272 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 HLA-DOBP13765 273 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 CDH2P19022 906 aaPredicted RBP13.76□□□□□ -0.21
TOM1-212ENST00000456128 HOXC12P31275 282 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 RBM34P42696 430 aaKnown RBP13.76□□□□□ -0.21
TOM1-212ENST00000456128 POU3F1Q03052 451 aaPredicted RBP13.76□□□□□ -0.21
TOM1-212ENST00000456128 KLHL17Q6TDP4 642 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 TMEM108Q6UXF1 575 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 NHLRC1Q6VVB1 395 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 LINGO2Q7L985 606 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 PXKQ7Z7A4 578 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 NKAIN4Q8IVV8 208 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 TMEM123Q8N131 208 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 PIK3C3Q8NEB9 887 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 LILRB1Q8NHL6 650 aaPredicted RBP13.76□□□□□ -0.21
TOM1-212ENST00000456128 MEPEQ9NQ76 525 aaPredicted RBP13.76□□□□□ -0.21
TOM1-212ENST00000456128 ZNF229Q9UJW7 825 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 MAGED1Q9Y5V3 778 aaPredicted RBP13.76□□□□□ -0.21
TOM1-212ENST00000456128 ZFHX3Q15911 3703 aa13.76□□□□□ -0.21
TOM1-212ENST00000456128 PRRC2AP48634 2157 aaKnown RBP13.75□□□□□ -0.21
TOM1-212ENST00000456128 RPL36A-HNRNPH2H7BZ11 118 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 OR6A2O95222 327 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 ZNF682O95780 498 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 IGF2P01344 180 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 MT-ND1P03886 318 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 ASAH2BP0C7U1 165 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 ADORA3P0DMS8 318 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 AHCYP23526 432 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 PTAFRP25105 342 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 ZNF83P51522 516 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 SH3BGRP55822 239 aaPredicted RBP13.75□□□□□ -0.21
TOM1-212ENST00000456128 SLC25A3Q00325 362 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 ROR2Q01974 943 aaKnown RBP13.75□□□□□ -0.21
TOM1-212ENST00000456128 ZNF672Q499Z4 452 aaPredicted RBP13.75□□□□□ -0.21
TOM1-212ENST00000456128 HIKESHIQ53FT3 197 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 HMBOX1Q6NT76 420 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 KLHL24Q6TFL4 600 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 CBLL1Q75N03 491 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 VTCN1Q7Z7D3 282 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 GPR137CQ8N3F9 429 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 ANKS4BQ8N8V4 417 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 KBTBD8Q8NFY9 601 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 OR1K1Q8NGR3 316 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 TMEM255BQ8WV15 326 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 TMEM239Q8WW34 195 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 IGFBPL1Q8WX77 278 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 GEMIN6Q8WXD5 167 aaKnown RBP13.75□□□□□ -0.21
TOM1-212ENST00000456128 RADILQ96JH8 1075 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 OBP2BQ9NPH6 170 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 A4GNTQ9UNA3 340 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 MGAT4BQ9UQ53 548 aa13.75□□□□□ -0.21
TOM1-212ENST00000456128 SLC35F4A4IF30 521 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 ABCD4O14678 606 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 SMPD2O60906 423 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 TMCC2O75069 709 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 WNT11O96014 354 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 SERPINA1P01009 418 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 HIST1H2ABP04908 130 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 IFNW1P05000 195 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 CD40P25942 277 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 IFNA8P32881 189 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 UGT2B15P54855 530 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 PRPS1P60891 318 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 ST3GAL3Q11203 375 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 ZP4Q12836 540 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 TBRG1Q3YBR2 411 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 HIST3H2AQ7L7L0 130 aa13.74□□□□□ -0.21
TOM1-212ENST00000456128 SLC46A3Q7Z3Q1 461 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms