RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ANKRD61A6NGH8 418 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 GLTPD2A6NH11 291 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MSI1O43347 362 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 RNGTTO60942 597 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF217O75362 1048 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 LCATP04180 440 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 OR1D2P34982 312 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 GLYR1Q49A26 553 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 PRAMEF20Q5VT98 475 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 OR51S1Q8NGJ8 323 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 PCNPQ8WW12 178 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 PSMG2Q969U7 264 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ESRP2Q9H6T0 727 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SARDHQ9UL12 918 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 IGLV3-22A0A075B6J6 115 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM189-UBE2V1I3L0A0 370 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 PLSCR1O15162 318 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 LAMP1P11279 417 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 COX5AP20674 150 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 DSC2Q02487 901 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 DOC2BQ14184 412 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 DEGS2Q6QHC5 323 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 RGL4Q8IZJ4 473 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MMP21Q8N119 569 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 C1orf198Q9H425 327 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 PCDHGA7Q9Y5G6 932 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 OR2C1O95371 312 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 H2AFB1P0C5Y9 115 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 POU2F1P14859 743 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 RAB13P51153 203 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 AGFG1P52594 562 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 GANABQ14697 944 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 TAZQ16635 292 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ENTHD1Q8IYW4 607 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ARL6IP6Q8N6S5 226 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 FBXL20Q96IG2 436 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 POLDIP2Q9Y2S7 368 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 AK6Q9Y3D8 172 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 CACNG3O60359 315 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 GSTP1P09211 210 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 LIMS3P0CW19 117 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 LIMS4P0CW20 117 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ADH5P11766 374 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 EEF1A1P68104 462 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MEP1AQ16819 746 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 PDZD11Q5EBL8 140 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 EEF1A1P5Q5VTE0 462 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 FBXW12Q6X9E4 464 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 Q6ZRG5 221 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 LPAR4Q99677 370 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 BANF2Q9H503 90 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 FOXJ3Q9UPW0 622 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 LTBP4Q8N2S1 1624 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 GREB1LQ9C091 1923 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 C2orf92A0A1B0GVN3 265 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 RPS10-NUDT3A0A1W2PQS6 291 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF705FA8MVS1 300 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 M0R2N6 131 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SPDEFO95238 335 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF705DP0CH99 300 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF705BP0CI00 300 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 KIR2DS2P43631 304 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 RPS10P46783 165 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ATP5IP56385 69 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 PPP1CAP62136 330 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ARL16Q0P5N6 197 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SHHQ15465 462 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SOWAHCQ53LP3 525 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 NHSL2Q5HYW2 709 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 CPT1CQ8TCG5 803 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ARSGQ96EG1 525 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 NSUN5Q96P11 429 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 COL25A1Q9BXS0 654 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 UBE2ZQ9H832 354 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ELOVL3Q9HB03 270 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 RAB18Q9NP72 206 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 A0A1W2PQH9 124 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 ARGFXA6NJG6 315 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 EPHB6O15197 1021 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 CPEP16870 476 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 DPP4P27487 766 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 UFM1P61960 85 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MC1RQ01726 317 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 DHODHQ02127 395 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 APOFQ13790 326 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MKXQ8IYA7 352 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 OR4E2Q8NGC2 313 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 MTFMTQ96DP5 389 aaKnown RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM43Q9BTV4 400 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SUCNR1Q9BXA5 334 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 TOLLIPQ9H0E2 274 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 A4GALTQ9NPC4 353 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 NECAP2Q9NVZ3 263 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 TIMM22Q9Y584 194 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 LOC105369274A0A096LPK9 316 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SEC14L6B5MCN3 397 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 SSTR3P32745 418 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-204ENST00000455883 NPNTQ6UXI9 565 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 TMPRSS7Q7RTY8 843 aa4.86□□□□□ -1.63
CSMD3-204ENST00000455883 BAGE3Q86Y29 109 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms