RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ZCCHC3Q9NUD5 404 aaKnown RBP4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 SLC39A1Q9NY26 324 aa4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 SMPD3Q9NY59 655 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 MAT2BQ9NZL9 334 aa4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 PTGFRNQ9P2B2 879 aa4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 STX18Q9P2W9 335 aaKnown RBP4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 ZNF639Q9UID6 485 aa4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 FAF1Q9UNN5 650 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 MMACHCQ9Y4U1 282 aa4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 SDK2Q58EX2 2172 aa4.7□□□□□ -1.66
HMGB1P4-201ENST00000455362 AKAP13Q12802 2813 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 PTPRBP23467 1997 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 IGKV3D-11A0A0A0MRZ8 115 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 A0A1W2PNU3 283 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 XKRY2A2RUG3 117 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 FAM149AA5PLN7 773 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 TMEM8BA6NDV4 472 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 ANKUB1A6NFN9 424 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 VSTM2BA6NLU5 285 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 DUXAA6NLW8 204 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 EIF4E1BA6NMX2 242 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 H3BNX3 289 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 HMGN4O00479 90 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 OR10H2O60403 315 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 CSO75390 466 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 PLGP00747 810 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 GPIP06744 558 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 CT62P0C5K7 136 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 OR12D1P0DN82 309 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 CALCBP10092 127 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 UMPSP11172 480 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 ANPEPP15144 967 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 NDUFB7P17568 137 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 NT5EP21589 574 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 ETV5P41161 510 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 MAP3K8P41279 467 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 MAGEB1P43366 347 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 EFNA3P52797 238 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 CLDN6P56747 220 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 DSTNP60981 165 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SNRPEP62304 92 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 MRPS22P82650 360 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 CDK6Q00534 326 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SPIBQ01892 262 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SERTAD2Q14140 314 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SSPNQ14714 243 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 RCN1Q15293 331 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 NSDHLQ15738 373 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 MEP1AQ16819 746 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 ZNF630Q2M218 657 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 C2orf68Q2NKX9 166 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 NADK2Q4G0N4 442 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 RNASE12Q5GAN4 147 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 MTX3Q5HYI7 312 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SPATA46Q5T0L3 261 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 GCNT6Q5T4J0 391 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 DCAF12Q5T6F0 453 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 LCN10Q6JVE6 187 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 REEP3Q6NUK4 255 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 MFSD12Q6NUT3 480 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 TNFAIP8L2Q6P589 184 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 VWA1Q6PCB0 445 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 CEACAM20Q6UY09 585 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 CCDC80Q76M96 950 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 ASCL5Q7RTU5 278 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 NRARPQ7Z6K4 114 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 TMEM151BQ8IW70 566 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SLC30A8Q8IWU4 369 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 EID3Q8N140 333 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 PAPD5Q8NDF8 572 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 PLPP5Q8NEB5 264 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 C7orf57Q8NEG2 295 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 DEFB124Q8NES8 71 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 OR1J2Q8NGS2 313 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 DOK4Q8TEW6 326 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 WIPF2Q8TF74 440 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SLC38A5Q8WUX1 472 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 CANT1Q8WVQ1 401 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 NEU4Q8WWR8 484 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 RAB8BQ92930 207 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 POP5Q969H6 163 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 MOB3AQ96BX8 217 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SENP5Q96HI0 755 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SLC35G5Q96KT7 338 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 LRFN5Q96NI6 719 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 PELOQ9BRX2 385 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SLC7A5P2Q9GIP4 190 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 VN1R1Q9GZP7 353 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 SLC26A1Q9H2B4 701 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 OR51I1Q9H343 314 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 MAGIXQ9H6Y5 334 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 A4GALTQ9NPC4 353 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 DCAF13Q9NV06 445 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 ARMC1Q9NVT9 282 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 THUMPD1Q9NXG2 353 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 CTSFQ9UBX1 484 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 GPR132Q9UNW8 380 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 MRPS7Q9Y2R9 242 aaKnown RBP4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 LOXL2Q9Y4K0 774 aa4.69□□□□□ -1.66
HMGB1P4-201ENST00000455362 AP4S1Q9Y587 144 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms