RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 GPR171O14626 319 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 OR6A2O95222 327 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 PRKACGP22612 351 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 C4orf17Q53FE4 359 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 EEF1A1P5Q5VTE0 462 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 PPP4R4Q6NUP7 873 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 RPL13AP3Q6NVV1 102 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 MTFR2Q6P444 385 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 PLXDC2Q6UX71 529 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 NHLRC1Q6VVB1 395 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 RASSF6Q6ZTQ3 369 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 STK32CQ86UX6 486 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 MEX3DQ86XN8 651 aaKnown RBP10.31□□□□□ -0.76
SCN9A-204ENST00000452182 EPHX4Q8IUS5 362 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 MCEMP1Q8IX19 187 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 ATG16L2Q8NAA4 619 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 ICA1LQ8NDH6 482 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 OR9K2Q8NGE7 335 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 OR51A7Q8NH64 312 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 TNFRSF13CQ96RJ3 184 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 NIPSNAP1Q9BPW8 284 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 UCK2Q9BZX2 261 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF556Q9HAH1 456 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 RNPEPL1Q9HAU8 725 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 MCCC2Q9HCC0 563 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 IL20Q9NYY1 176 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 EMC3Q9P0I2 261 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 SH3BGRL2Q9UJC5 107 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 NOX1Q9Y5S8 564 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 RELNP78509 3460 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF462Q96JM2 2506 aa10.31□□□□□ -0.76
SCN9A-204ENST00000452182 TRAV27A0A087WT01 109 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 SAC3D1A6NKF1 404 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 HSPB2A8KAH6 182 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 CASQ2O14958 399 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-204ENST00000452182 HPRP00739 348 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 PLGP00747 810 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-204ENST00000452182 YES1P07947 543 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 POU2F1P14859 743 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF43P17038 809 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 AHCYP23526 432 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 AQP2P41181 271 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 FXYD6P3P58550 94 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 PPP2R2BQ00005 443 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 PMPCAQ10713 525 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 HSPB2Q16082 182 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 ALG10Q5BKT4 473 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 KDM4DQ6B0I6 523 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 SMARCD3Q6STE5 483 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF620Q6ZNG0 422 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 CREB3L2Q70SY1 520 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 FAM214BQ7L5A3 538 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 GPAT4Q86UL3 456 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 UEVLDQ8IX04 471 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 PARP8Q8N3A8 854 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 LRRC75AQ8NAA5 344 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 GTPBP3Q969Y2 492 aaKnown RBP10.3□□□□□ -0.76
SCN9A-204ENST00000452182 TMEM45BQ96B21 275 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 GPX7Q96SL4 187 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-204ENST00000452182 CIB1Q99828 191 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 RBM4BQ9BQ04 359 aaKnown RBP10.3□□□□□ -0.76
SCN9A-204ENST00000452182 C9orf16Q9BUW7 83 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 RBM4Q9BWF3 364 aaKnown RBP10.3□□□□□ -0.76
SCN9A-204ENST00000452182 NDEL1Q9GZM8 345 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 USE1Q9NZ43 259 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 KIF17Q9P2E2 1029 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 FLVCR1Q9Y5Y0 555 aa10.3□□□□□ -0.76
SCN9A-204ENST00000452182 RP1L1Q8IWN7 2480 aaPredicted RBP10.3□□□□□ -0.76
SCN9A-204ENST00000452182 A0A0G2JNJ9 132 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 LRRTM2O43300 516 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 RNF13O43567 381 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 TRAF3IP2O43734 574 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 NDUFB2O95178 105 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 IL18BPO95998 194 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 TMIGD3P0DMS9 266 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF26P17031 533 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 DAPP51397 102 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 PER3P56645 1201 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 SLC34A1Q06495 639 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 RFX4Q33E94 735 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 TMEM201Q5SNT2 666 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 KLHL17Q6TDP4 642 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 TUSC5Q8IXB3 177 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 KDM8Q8N371 416 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 ZIC4Q8N9L1 334 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 NAXEQ8NCW5 288 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 MOSPD2Q8NHP6 518 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 FANK1Q8TC84 345 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 RND1Q92730 232 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 EME1Q96AY2 570 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 SFXN3Q9BWM7 321 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 OR52D1Q9H346 318 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 C8orf4Q9NR00 106 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 PAPOLBQ9NRJ5 636 aaKnown RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 INIPQ9NRY2 104 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 REV1Q9UBZ9 1251 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF629Q9UEG4 869 aaPredicted RBP10.29□□□□□ -0.76
SCN9A-204ENST00000452182 Q9UFV3 132 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 POFUT2Q9Y2G5 429 aa10.29□□□□□ -0.76
SCN9A-204ENST00000452182 EMC9Q9Y3B6 208 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms