RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 CGB2Q6NT52 195 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 ZNF544Q6NX49 715 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 ANKRD16Q6P6B7 361 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 KLHL24Q6TFL4 600 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 Q71RC1 249 aaPredicted RBP16.94■□□□□ 0.3
USP40-207ENST00000450940 CCDC80Q76M96 950 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 OR10A6Q8NH74 314 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 ALKBH3Q96Q83 286 aaPredicted RBP16.94■□□□□ 0.3
USP40-207ENST00000450940 MCHR1Q99705 422 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 NELFAQ9H3P2 528 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 FKRPQ9H9S5 495 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 CBLN4Q9NTU7 201 aa16.94■□□□□ 0.3
USP40-207ENST00000450940 M0R3H8 397 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 FXYD1O00168 92 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 SLC43A1O75387 559 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 LYPD3O95274 346 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 ARFIP2P53365 341 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 CRYBA2P53672 197 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 ROR2Q01974 943 aaKnown RBP16.93■□□□□ 0.3
USP40-207ENST00000450940 VMACQ2NL98 169 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 C3orf36Q3SXR2 165 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 INTS11Q5TA45 600 aaKnown RBP16.93■□□□□ 0.3
USP40-207ENST00000450940 CALHM3Q86XJ0 350 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 TMEM123Q8N131 208 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 FAM169BQ8N8A8 192 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 OR6T1Q8NGN1 323 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 TAMM41Q96BW9 452 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 OR2M2Q96R28 347 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 SH3GL1Q99961 368 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 PCDHAC1Q9H158 963 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 BARX1Q9HBU1 254 aaPredicted RBP16.93■□□□□ 0.3
USP40-207ENST00000450940 SAR1AQ9NR31 198 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 FGFR1OP2Q9NVK5 253 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 MRPL39Q9NYK5 338 aaKnown RBP16.93■□□□□ 0.3
USP40-207ENST00000450940 CRNNQ9UBG3 495 aaPredicted RBP16.93■□□□□ 0.3
USP40-207ENST00000450940 POU2F3Q9UKI9 436 aa16.93■□□□□ 0.3
USP40-207ENST00000450940 CR1P17927 2039 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 CHP2O43745 196 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 NDUFS7O75251 213 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 HPRP00739 348 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 OPN1SWP03999 348 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 FABP6P51161 128 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 KLF10Q13118 480 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 C1DQ13901 141 aaKnown RBP16.92■□□□□ 0.3
USP40-207ENST00000450940 HMBOX1Q6NT76 420 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 FBXL14Q8N1E6 418 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 MUC15Q8N387 334 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 OR8J3Q8NGG0 315 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 OR4D11Q8NGI4 311 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 LRRC58Q96CX6 371 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 MOGAT1Q96PD6 335 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 ASPNQ9BXN1 380 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 CCDC134Q9H6E4 229 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 GPR35Q9HC97 309 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 MOV10Q9HCE1 1003 aaKnown RBP16.92■□□□□ 0.3
USP40-207ENST00000450940 GDF2Q9UK05 429 aaPredicted RBP16.92■□□□□ 0.3
USP40-207ENST00000450940 ARFGEF3Q5TH69 2177 aa16.92■□□□□ 0.3
USP40-207ENST00000450940 IGHV1-18A0A0C4DH31 117 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 BBIP1A8MTZ0 92 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 AKAP8O43823 692 aaKnown RBP16.91■□□□□ 0.3
USP40-207ENST00000450940 MT-ATP6P00846 226 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 THY1P04216 161 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 HLA-DOBP13765 273 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 PTNP21246 168 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 CBLP22681 906 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 APOBEC3AP31941 199 aaPredicted RBP16.91■□□□□ 0.3
USP40-207ENST00000450940 ACVR1BP36896 505 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 ARF1P84077 181 aaKnown RBP16.91■□□□□ 0.3
USP40-207ENST00000450940 ENTPD8Q5MY95 495 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 RBM45Q8IUH3 476 aaKnown RBP16.91■□□□□ 0.3
USP40-207ENST00000450940 UEVLDQ8IX04 471 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 PIK3C3Q8NEB9 887 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 RNF217Q8TC41 542 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 RASSF5Q8WWW0 418 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 LRR1Q96L50 414 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 SLC38A2Q96QD8 506 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 ZNF426Q9BUY5 554 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 NOX1Q9Y5S8 564 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 HIVEP2P31629 2446 aa16.91■□□□□ 0.3
USP40-207ENST00000450940 ATP6V1G2-DDX39BF2Z307 99 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 H7C417 338 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 PLPP3O14495 311 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 IGLV1-44P01699 117 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 PMS2P3Q13401 168 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 VEZF1Q14119 521 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 RABL3Q5HYI8 236 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 WDR88Q6ZMY6 472 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 PXKQ7Z7A4 578 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 TSPYL5Q86VY4 417 aaPredicted RBP16.9■□□□□ 0.3
USP40-207ENST00000450940 C20orf196Q8IYI0 205 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 GPR137CQ8N3F9 429 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 ADAMTS16Q8TE57 1224 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 ZNF837Q96EG3 531 aaPredicted RBP16.9■□□□□ 0.3
USP40-207ENST00000450940 ADAD1Q96M93 576 aaKnown RBP16.9■□□□□ 0.3
USP40-207ENST00000450940 HS6ST2Q96MM7 605 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 KATNB1Q9BVA0 655 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 CACNG6Q9BXT2 260 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 REG4Q9BYZ8 158 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 MOKQ9UQ07 419 aa16.9■□□□□ 0.3
USP40-207ENST00000450940 ATP23Q9Y6H3 246 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms