RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 RPL13AP3Q6NVV1 102 aa13.46□□□□□ -0.26
SF1-211ENST00000448404 SLC35D2Q76EJ3 337 aa13.46□□□□□ -0.26
SF1-211ENST00000448404 C17orf82Q86X59 251 aaPredicted RBP13.46□□□□□ -0.26
SF1-211ENST00000448404 RGP1Q92546 391 aaPredicted RBP13.46□□□□□ -0.26
SF1-211ENST00000448404 DDOQ99489 341 aa13.46□□□□□ -0.26
SF1-211ENST00000448404 GALNT9Q9HCQ5 603 aa13.46□□□□□ -0.26
SF1-211ENST00000448404 POLHQ9Y253 713 aa13.46□□□□□ -0.26
SF1-211ENST00000448404 ZNF337Q9Y3M9 751 aa13.46□□□□□ -0.26
SF1-211ENST00000448404 TRAV6A0A075B6T7 132 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 EFCAB7A8K855 629 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 HTR2BP41595 481 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 GRK6P43250 576 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 MAP2K3P46734 347 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 DIO1P49895 249 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 SIRPAP78324 504 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 EBPQ15125 230 aaKnown RBP13.45□□□□□ -0.26
SF1-211ENST00000448404 TATDN3Q17R31 274 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 MESTQ5EB52 335 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 PM20D2Q8IYS1 436 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 OR6V1Q8N148 313 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 OR51A4Q8NGJ6 313 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 C8orf44Q96CB5 159 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 LCORQ96JN0 433 aaPredicted RBP13.45□□□□□ -0.26
SF1-211ENST00000448404 KCNN2Q9H2S1 579 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 NOX4Q9NPH5 578 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 BRD7Q9NPI1 651 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 ICAM5Q9UMF0 924 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 FAM240BA0A1B0GVZ2 78 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 BCAT2O15382 392 aaPredicted RBP13.45□□□□□ -0.26
SF1-211ENST00000448404 ARHGEF9O43307 516 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 LYRM1O43325 122 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 ZFPL1O95159 310 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 PDGFBP01127 241 aaPredicted RBP13.45□□□□□ -0.26
SF1-211ENST00000448404 FBLP22087 321 aaKnown RBP13.45□□□□□ -0.26
SF1-211ENST00000448404 RORAP35398 523 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 INPP1P49441 399 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 SKP1P63208 163 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 KRR1Q13601 381 aaKnown RBP13.45□□□□□ -0.26
SF1-211ENST00000448404 CDK5R1Q15078 307 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 MEP1BQ16820 701 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 TCTE1Q5JU00 501 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 HBMQ6B0K9 141 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 DPY19L4Q7Z388 723 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 DUSP19Q8WTR2 217 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 TSPAN32Q96QS1 320 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 TMEM43Q9BTV4 400 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 ZNF304Q9HCX3 659 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 PRODH2Q9UF12 536 aa13.45□□□□□ -0.26
SF1-211ENST00000448404 AKR7A3O95154 331 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 IL33O95760 270 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 WNT11O96014 354 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 IL12BP29460 328 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 PPICP45877 212 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 MTNR1BP49286 362 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 DGCR2P98153 550 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 PLCXD2Q0VAA5 305 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 PLA2G7Q13093 441 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 INPP5JQ15735 1006 aaPredicted RBP13.44□□□□□ -0.26
SF1-211ENST00000448404 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.44□□□□□ -0.26
SF1-211ENST00000448404 WBP2NLQ6ICG8 309 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 ZNF574Q6ZN55 896 aaPredicted RBP13.44□□□□□ -0.26
SF1-211ENST00000448404 MDGA2Q7Z553 956 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 WDFY1Q8IWB7 410 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 CCDC74AQ96AQ1 378 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 GFI1Q99684 422 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 RNF121Q9H920 327 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 ALG5Q9Y673 324 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 IGKV3D-11A0A0A0MRZ8 115 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 ABCD3P28288 659 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 RPS15P62841 145 aaKnown RBP13.44□□□□□ -0.26
SF1-211ENST00000448404 MELKQ14680 651 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 GUSBP11Q6P575 273 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 DPY19L2P2Q6ZN68 376 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 RNF166Q96A37 237 aaPredicted RBP13.44□□□□□ -0.26
SF1-211ENST00000448404 OMA1Q96E52 524 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 MAP6Q96JE9 813 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 JAM3Q9BX67 310 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 KCNK15Q9H427 330 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 AUNIPQ9H7T9 357 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 APMAPQ9HDC9 416 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 IKZF2Q9UKS7 526 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 LOC400499M0QZD8 3231 aa13.44□□□□□ -0.26
SF1-211ENST00000448404 SC5DO75845 299 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 HLA-DOBP13765 273 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 RAB3BP20337 219 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 F8A1P23610 371 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 RPS4XP62701 263 aaKnown RBP13.43□□□□□ -0.26
SF1-211ENST00000448404 FOXK1P85037 733 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 SQSTM1Q13501 440 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 PLET1Q6UQ28 207 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 FAM122BQ7Z309 247 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 JAZF1Q86VZ6 243 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 OR6N2Q8NGY6 317 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 FRMD6Q96NE9 622 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 ANKRD10Q9NXR5 420 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 SPEF1Q9Y4P9 236 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 MN1Q10571 1320 aaPredicted RBP13.43□□□□□ -0.26
SF1-211ENST00000448404 FITM1A5D6W6 292 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 H0YC42 278 aa13.43□□□□□ -0.26
SF1-211ENST00000448404 MASP2O00187 686 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms