RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 A0A1B0GWA3 101 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 PRSS38A1L453 326 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 RNF212BA8MTL3 300 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 SLC10A3P09131 477 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 MAOBP27338 520 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 TACR3P29371 465 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 BLVRBP30043 206 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-204ENST00000448183 TRIM23P36406 574 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 NUDT1P36639 197 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 MTCP1P56278 107 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 HBG1P69891 147 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 HBG2P69892 147 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 CATR1Q13166 79 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 ALKBH1Q13686 389 aaKnown RBP7.21□□□□□ -1.26
NEDD9-204ENST00000448183 SMAD2Q15796 467 aaKnown RBP7.21□□□□□ -1.26
NEDD9-204ENST00000448183 MDGA2Q7Z553 956 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 SLC43A2Q8N370 569 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 OR6M1Q8NGM8 313 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 OR10R2Q8NGX6 335 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 SEC22CQ9BRL7 303 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 NIPSNAP3BQ9BS92 247 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 UBQLN3Q9H347 655 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 TUBB1Q9H4B7 451 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.21□□□□□ -1.26
NEDD9-204ENST00000448183 HCFC1R1Q9NWW0 138 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 PLEKHM1Q9Y4G2 1056 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 LRIT2A6NDA9 550 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 SERINC4A6NH21 518 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 H7C1C5 153 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 PIPP12273 146 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-204ENST00000448183 DRD1P21728 446 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 OR1D4P47884 311 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 RAB38P57729 211 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 LCN6P62502 163 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 MZT1Q08AG7 82 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 DBPQ10586 325 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF266Q14584 549 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 RPE65Q16518 533 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 IAH1Q2TAA2 248 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-204ENST00000448183 MARCH8Q5T0T0 291 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 LPCAT3Q6P1A2 487 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 BRICD5Q6PL45 260 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 FAM111BQ6SJ93 734 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF852Q6ZMS4 543 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 DPY19L2P2Q6ZN68 376 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 ESPNLQ6ZVH7 1005 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 BCDIN3DQ7Z5W3 292 aaKnown RBP7.21□□□□□ -1.26
NEDD9-204ENST00000448183 WDR5BQ86VZ2 330 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 SLC22A24Q8N4F4 322 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 NANOGP1Q8N7R0 232 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 LMNTD1Q8N9Z9 388 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 ZNF740Q8NDX6 193 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 SLC25A46Q96AG3 418 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 DAZAP1Q96EP5 407 aaKnown RBP7.21□□□□□ -1.26
NEDD9-204ENST00000448183 TEX37Q96LM6 180 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 FBXO8Q9NRD0 319 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 GDE1Q9NZC3 331 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 NCDNQ9UBB6 729 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 STEAP1Q9UHE8 339 aa7.21□□□□□ -1.26
NEDD9-204ENST00000448183 ZFAND5O76080 213 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 SCAF4O95104 1147 aaKnown RBP7.2□□□□□ -1.26
NEDD9-204ENST00000448183 OPN1LWP04000 364 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 FCGR2AP12318 317 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 DPP4P27487 766 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 SERPINF1P36955 418 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 XKR7Q5GH72 579 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 TMEM201Q5SNT2 666 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 OR52W1Q6IF63 320 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 CD300LGQ6UXG3 332 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 DLEU7Q6UYE1 221 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 SHISA6Q6ZSJ9 500 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 GDF7Q7Z4P5 450 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 FAM3DQ96BQ1 224 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 AMDHD1Q96NU7 426 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 UHRF2Q96PU4 802 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 FYTTD1Q96QD9 318 aaKnown RBP7.2□□□□□ -1.26
NEDD9-204ENST00000448183 PIGMQ9H3S5 423 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 GLIPR2Q9H4G4 154 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 PURGQ9UJV8 347 aaKnown RBP7.2□□□□□ -1.26
NEDD9-204ENST00000448183 HS3ST2Q9Y278 367 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 HMX2A2RU54 273 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 PPP1R2P9O14990 202 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 BET1O15155 118 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 CNMDO75829 334 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 NSA2O95478 260 aaKnown RBP7.2□□□□□ -1.26
NEDD9-204ENST00000448183 CD14P08571 375 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 NAGAP17050 411 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 CPT2P23786 658 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 MMP11P24347 488 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 TEAD1P28347 426 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 FOLR3P41439 243 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 CASP6P55212 293 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 AADACL3Q5VUY0 350 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 OR5M10Q6IEU7 315 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 BPHLQ86WA6 291 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-204ENST00000448183 CCDC71Q8IV32 467 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-204ENST00000448183 RAB39BQ96DA2 213 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 DDOQ99489 341 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 PRSS16Q9NQE7 514 aa7.2□□□□□ -1.26
NEDD9-204ENST00000448183 SLC39A9Q9NUM3 307 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms