RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 SCN4AP35499 1836 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 HEATR9A2RTY3 570 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 GSAPA4D1B5 854 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 OR51F1A6NGY5 319 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 C15orf61A6NNL5 157 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 PMS2P5A8MQ11 134 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 BLOC1S5-TXNDC5H3BN57 136 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 CCL22O00626 93 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 IMPA2O14732 288 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 TNFSF12O43508 249 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 OR1F1O43749 312 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 TSC22D2O75157 780 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 BCAS1O75363 584 aaPredicted RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 CEACAM4O75871 244 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 ECDO95905 644 aaPredicted RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 SLC2A3P11169 496 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 MYOGP15173 224 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 CD1EP15812 388 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 CHRNB4P30926 498 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 ACADVLP49748 655 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 CSRP3P50461 194 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 NDST2P52849 883 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 PLK1P53350 603 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 ACLYP53396 1101 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 ERVK-16P61578 105 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 SLC10A7Q0GE19 358 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 ART3Q13508 389 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 ENPP2Q13822 863 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 CYLC2Q14093 348 aaPredicted RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 FAM189A2Q15884 450 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 PSMD5Q16401 504 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 LRRC36Q1X8D7 754 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 CLLU1OSQ5K130 101 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 PPM1LQ5SGD2 360 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 DMKNQ6E0U4 476 aaPredicted RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 RHBDD2Q6NTF9 364 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 IZUMO2Q6UXV1 221 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 DHDDSQ86SQ9 333 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 HPS6Q86YV9 775 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 LRRC49Q8IUZ0 686 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 ZNF683Q8IZ20 524 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 ATP6V0D2Q8N8Y2 350 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 NFAM1Q8NET5 270 aaPredicted RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 OR6F1Q8NGZ6 308 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 TRMT10AQ8TBZ6 339 aaKnown RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 PCNPQ8WW12 178 aaKnown RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 PYDC1Q8WXC3 89 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 OSTF1Q92882 214 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 PSMG2Q969U7 264 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 IMP4Q96G21 291 aaKnown RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 B3GALT6Q96L58 329 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 RANBP9Q96S59 729 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 SERPINI1Q99574 410 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 ECSITQ9BQ95 431 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 MRPL57Q9BQC6 102 aaKnown RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 CCDC28BQ9BUN5 200 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 APOOQ9BUR5 198 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 SLC25A51Q9H1U9 297 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 VCXQ9H320 206 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 POMKQ9H5K3 350 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 NRN1Q9NPD7 142 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 B3GAT2Q9NPZ5 323 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 STARD5Q9NSY2 213 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 NLGN3Q9NZ94 848 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 KLRF1Q9NZS2 232 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 EIF3KQ9UBQ5 218 aaKnown RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 CLEC4AQ9UMR7 237 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 PRPF19Q9UMS4 504 aaKnown RBP3.47□□□□□ -1.85
VPS29-202ENST00000447578 POMPQ9Y244 141 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 RNF115Q9Y4L5 304 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 AP4B1Q9Y6B7 739 aa3.47□□□□□ -1.85
VPS29-202ENST00000447578 SCN1AP35498 2009 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 IGLV3-10A0A075B6K4 115 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 IGKV3D-15A0A087WSY6 115 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 TRPC5OSA6NMA1 111 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 A8MT66 165 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 PPIAL4DF5H284 164 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 F5H5T6 163 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 TXNDC9O14530 226 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 GPRIN2O60269 458 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 RBP1P09455 135 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 UBTFL6P0CB48 400 aaPredicted RBP3.46□□□□□ -1.86
VPS29-202ENST00000447578 CCDC166P0CW27 439 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 EDNRAP25101 427 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 OR1E1P30953 314 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 GDI1P31150 447 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 RFC2P35250 354 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 TAGLN2P37802 199 aaKnown RBP3.46□□□□□ -1.86
VPS29-202ENST00000447578 CDKN2DP55273 166 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 PKNOX1P55347 436 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 DNAJB13P59910 316 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 SNRPD1P62314 119 aaKnown RBP3.46□□□□□ -1.86
VPS29-202ENST00000447578 RPS27AP62979 156 aaKnown RBP3.46□□□□□ -1.86
VPS29-202ENST00000447578 TNFRSF17Q02223 184 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 PJVKQ0ZLH3 352 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 ZNF235Q14590 738 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 CDKN3Q16667 212 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 FAM83EQ2M2I3 478 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 PARP15Q460N3 678 aa3.46□□□□□ -1.86
VPS29-202ENST00000447578 KCTD21Q4G0X4 260 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms