RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SLC46A3Q7Z3Q1 461 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 UEVLDQ8IX04 471 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 DEFB107AQ8IZN7 70 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 FAM86B1Q8N7N1 296 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 SCAIQ8N9R8 606 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 POMGNT2Q8NAT1 580 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 OR5J2Q8NH18 312 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 GEMIN6Q8WXD5 167 aaKnown RBP13.04□□□□□ -0.32
HDAC4-204ENST00000446876 TXNDC15Q96J42 360 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 CDRT15Q96T59 188 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 EMC6Q9BV81 110 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 POLR2J2Q9GZM3 115 aaKnown RBP13.04□□□□□ -0.32
HDAC4-204ENST00000446876 POLR2J3Q9H1A7 115 aaKnown RBP13.04□□□□□ -0.32
HDAC4-204ENST00000446876 C20orf141Q9NUB4 165 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 MED29Q9NX70 200 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 V9GYQ6 96 aa13.04□□□□□ -0.32
HDAC4-204ENST00000446876 FFAR1O14842 300 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 KRT33AO76009 404 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 ZNF432O94892 652 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 ATE1O95260 518 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 IFNW1P05000 195 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 ADORA3P0DMS8 318 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 UMPSP11172 480 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 AHCYP23526 432 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 MPGP29372 298 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 PUDPQ08623 228 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 TIMM23BQ5SRD1 257 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 ZNF704Q6ZNC4 412 aaPredicted RBP13.03□□□□□ -0.32
HDAC4-204ENST00000446876 MEX3DQ86XN8 651 aaKnown RBP13.03□□□□□ -0.32
HDAC4-204ENST00000446876 TMEM239Q8WW34 195 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 OR2M2Q96R28 347 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 SLC19A3Q9BZV2 496 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 FKRPQ9H9S5 495 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 NANSQ9NR45 359 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 RCE1Q9Y256 329 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 ROS1P08922 2347 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 CADP27708 2225 aa13.03□□□□□ -0.32
HDAC4-204ENST00000446876 DSCAMO60469 2012 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 OTOGQ6ZRI0 2925 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 LOC102725191A0A1B0GVB3 256 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 ZNF587BE7ETH6 402 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 SLC43A1O75387 559 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 MT-ND1P03886 318 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 RAF1P04049 648 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 HSD17B1P14061 328 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 DNASE1P24855 282 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 RBM34P42696 430 aaKnown RBP13.02□□□□□ -0.33
HDAC4-204ENST00000446876 BSPH1Q075Z2 132 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 HIKESHIQ53FT3 197 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 SAMD4BQ5PRF9 694 aaKnown RBP13.02□□□□□ -0.33
HDAC4-204ENST00000446876 PHYHD1Q5SRE7 291 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 NCMAPQ5T1S8 102 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 C16orf89Q6UX73 402 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 NHLRC1Q6VVB1 395 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 TSEN54Q7Z6J9 526 aaKnown RBP13.02□□□□□ -0.33
HDAC4-204ENST00000446876 TMEM123Q8N131 208 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 WDR31Q8NA23 367 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 NEUROG1Q92886 237 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 MUCL1Q96DR8 90 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 SGTBQ96EQ0 304 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 NSL1Q96IY1 281 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 MUS81Q96NY9 551 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 C1QTNF6Q9BXI9 259 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 MAN2C1Q9NTJ4 1040 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 TAS2R5Q9NYW4 299 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 CD300AQ9UGN4 299 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 ZNF229Q9UJW7 825 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 RPS6KA6Q9UK32 745 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 SLC25A15Q9Y619 301 aa13.02□□□□□ -0.33
HDAC4-204ENST00000446876 SLC35F4A4IF30 521 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 DPRXA6NFQ7 191 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 B2RBV5 119 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 ARPC2O15144 300 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 CLOCKO15516 846 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 OR7A10O76100 309 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 OR6A2O95222 327 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 ASAH2BP0C7U1 165 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 THRBP10828 461 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 FUT1P19526 365 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 ZNF83P51522 516 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 ART1P52961 327 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 NR1H2P55055 460 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 ROR2Q01974 943 aaKnown RBP13.01□□□□□ -0.33
HDAC4-204ENST00000446876 ST3GAL3Q11203 375 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 CAMK2DQ13557 499 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 KEAP1Q14145 624 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 MELKQ14680 651 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 OR7E24Q6IFN5 339 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 RINLQ6ZS11 566 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 NANOGNBQ7Z5D8 188 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 OFCC1Q8IZS5 231 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 C1orf162Q8NEQ5 155 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-204ENST00000446876 KBTBD8Q8NFY9 601 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 OR1K1Q8NGR3 316 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 NINJ1Q92982 152 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 ZNF837Q96EG3 531 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-204ENST00000446876 USB1Q9BQ65 265 aaKnown RBP13.01□□□□□ -0.33
HDAC4-204ENST00000446876 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 FNDC11Q9BVV2 318 aa13.01□□□□□ -0.33
HDAC4-204ENST00000446876 LINC00470Q9BZP3 86 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms