RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 IKZF1Q13422 519 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 OR2B11Q5JQS5 317 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 DCAF12Q5T6F0 453 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SLC16A9Q7RTY1 509 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ZNF808Q8N4W9 903 aaPredicted RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 ZNF566Q969W8 418 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 TMEM106AQ96A25 262 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 RRNAD1Q96FB5 475 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 PTDSS2Q9BVG9 487 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 OR10A2Q9H208 303 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ARRDC1-AS1Q9H2J1 176 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 C1GALT1Q9NS00 363 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 UBR2Q8IWV8 1755 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 A6NIZ1 184 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 MPPED1O15442 326 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ZNF136P52737 540 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 RAP1BP61224 184 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 RAP1AP62834 184 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 TATDN3Q17R31 274 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 OR52W1Q6IF63 320 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 NOXA1Q86UR1 476 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 TMEM174Q8WUU8 243 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 KIR3DX1Q9H7L2 352 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ACER3Q9NUN7 267 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ITGB1BP2Q9UKP3 347 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 MCTS1Q9ULC4 181 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 A0A087WUU8 490 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 A0A1W2PS29 197 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SHOXO15266 292 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ENSAO43768 121 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 SRPX2O60687 465 aaPredicted RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 ZNF14P17017 642 aaPredicted RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 SSR4P51571 173 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 AFF3P51826 1226 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 MTCP1P56278 107 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 MLLT11Q13015 90 aaPredicted RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 EDDM3AQ14507 147 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 AGBL4Q5VU57 503 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SLC7A13Q8TCU3 470 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SAT2Q96F10 170 aaPredicted RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 MFFQ9GZY8 342 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 NXT1Q9UKK6 140 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 PCDHGA5Q9Y5G8 931 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 HRH3Q9Y5N1 445 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ADAMTSL3P82987 1691 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SC5DO75845 299 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 IFNA2P01563 188 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 C1QCP02747 245 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 GAAP10253 952 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 OR10K2Q6IF99 312 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SIAH3Q8IW03 269 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 CA13Q8N1Q1 262 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ZNF417Q8TAU3 575 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 C15orf40Q8WUR7 153 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SLC22A13Q9Y226 551 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 MRPS2Q9Y399 296 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 OR51B4Q9Y5P0 310 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 CTNSO60931 367 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ZDHHC11BP0C7U3 371 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 CDAP32320 146 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 AGFG1P52594 562 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 CARD18P57730 90 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 IL13RA1P78552 427 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 BAIAP2L2Q6UXY1 529 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SLC46A3Q7Z3Q1 461 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 CCDC28AQ8IWP9 274 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 GDPD1Q8N9F7 314 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 UBALD1Q8TB05 177 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 PHB2Q99623 299 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ESRP2Q9H6T0 727 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 UBE2ZQ9H832 354 aaPredicted RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 LIN7BQ9HAP6 207 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SIAEQ9HAT2 523 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 A4GALTQ9NPC4 353 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 HHLA2Q9UM44 414 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 MRPS28Q9Y2Q9 187 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 ZNF281Q9Y2X9 895 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 NUP98P52948 1817 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ANKRD33BA6NCL7 494 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 F8W036 122 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 GFYI3L273 518 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 M0R082 166 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 HS3ST1O14792 307 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 IGLV3-27P01718 113 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 CEACAM5P06731 702 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 CBR1P16152 277 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 POLR2HP52434 150 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 TRA2BP62995 288 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 BLOC1S1P78537 153 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 FCN2Q15485 313 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 C14orf28Q4W4Y0 310 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SFXN4Q6P4A7 337 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 SFTPA2Q8IWL1 248 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ZNF595Q8IYB9 648 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 EID2BQ96D98 161 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 ZNF587Q96SQ5 575 aaPredicted RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 LMF2Q9BU23 707 aaKnown RBP7.36□□□□□ -1.23
RIF1-205ENST00000444746 PLAC1Q9HBJ0 212 aa7.36□□□□□ -1.23
RIF1-205ENST00000444746 PCDHB16Q9NRJ7 776 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms