RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 AUP1Q9Y679 476 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 CDH10Q9Y6N8 788 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 DOCK7Q96N67 2140 aa4.22□□□□□ -1.73
TM9SF3-202ENST00000443638 A0A087X002 238 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 A0A1B0GTH9 108 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 E9PLD3 99 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 BMPR1BO00238 502 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 CCL21O00585 134 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 SOX15O60248 233 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 VAPBO95292 243 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 FARS2O95363 451 aaKnown RBP4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 ETHE1O95571 254 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 SERPINB2P05120 415 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 C2P06681 752 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 GABRR2P28476 465 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 CHRNB4P30926 498 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 HTR1FP30939 366 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 TNNC1P63316 161 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 SIGLEC14Q08ET2 396 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 RPEL1Q2QD12 228 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 PGGHGQ32M88 737 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 ZNF324BQ6AW86 544 aaPredicted RBP4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 ARMCX5Q6P1M9 558 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 LINC00336Q6ZUF6 198 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 SNX20Q7Z614 316 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 LRRTM1Q86UE6 522 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 C9orf40Q8IXQ3 194 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 CMTM1Q8IZ96 169 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 METTL4Q8N3J2 472 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 CA5BP1Q8WTZ4 195 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 MRPL45Q9BRJ2 306 aaKnown RBP4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 BBS2Q9BXC9 721 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 FRMD8P1Q9BZ68 369 aaPredicted RBP4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 CHIAQ9BZP6 476 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 FLVCR2Q9UPI3 526 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 POFUT2Q9Y2G5 429 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 SAR1BQ9Y6B6 198 aa4.21□□□□□ -1.74
TM9SF3-202ENST00000443638 IGLV3-22A0A075B6J6 115 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 IGLV4-3A0A075B6K6 122 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 IGHV3-16A0A0C4DH30 117 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 GOLGA8QA0A0J9YX86 632 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 FAM231BA6NCW3 169 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 A8MUA0 341 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 LOC110117498-PIK3R3F6TDL0 507 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 MRPS12O15235 138 aaKnown RBP4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 UGT1A9O60656 530 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 CDK14O94921 469 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 H2AFZP0C0S5 128 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 ZNF3P17036 446 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 HOXB8P17481 243 aaPredicted RBP4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 PMCHP20382 165 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 IL32P24001 234 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 THBS3P49746 956 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 SLC26A2P50443 739 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 ARHGDIBP52566 201 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 RIDAP52758 137 aaKnown RBP4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 DLX5P56178 289 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 ERVFC1-1P60608 527 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 UBE2MP61081 183 aaKnown RBP4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 RPS15AP62244 130 aaKnown RBP4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 IRX3P78415 501 aaPredicted RBP4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 KRTAP1-1Q07627 177 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 CALCOCO2Q13137 446 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 COTL1Q14019 142 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 EMBQ6PCB8 327 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 SPESP1Q6UW49 350 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 ARCQ7LC44 396 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 PID1Q7Z2X4 250 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 DCUN1D3Q8IWE4 304 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 SPATA3Q8NHX4 192 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 STMN2Q93045 179 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 NEIL2Q969S2 332 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 PSMG2Q969U7 264 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 FAM131CQ96AQ9 280 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 PAGE5Q96GU1 130 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 NAF1Q96HR8 494 aaKnown RBP4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 CPB2Q96IY4 423 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 MS4A14Q96JA4 679 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 GLT1D1Q96MS3 346 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 CATSPER2Q96P56 530 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 ZNF317Q96PQ6 595 aaPredicted RBP4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 MAP1LC3CQ9BXW4 147 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 ZYG11BQ9C0D3 744 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 STMN3Q9NZ72 180 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 IFNKQ9P0W0 207 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 UXTQ9UBK9 157 aaPredicted RBP4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 ZNF229Q9UJW7 825 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 GGA2Q9UJY4 613 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 ADGRA3Q8IWK6 1321 aa4.2□□□□□ -1.74
TM9SF3-202ENST00000443638 IGKV1D-8A0A087WSZ0 117 aa4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 ERVV-2B6SEH9 535 aa4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 PDHXO00330 501 aa4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 CDX4O14627 284 aaPredicted RBP4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 SLC2A10O95528 541 aa4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 LALBAP00709 142 aa4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 FGGP02679 453 aa4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 MGMTP16455 207 aa4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 FASP25445 335 aa4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 LMO2P25791 158 aa4.19□□□□□ -1.74
TM9SF3-202ENST00000443638 CSKP41240 450 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms