RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 A4GALTQ9NPC4 353 aa11.98□□□□□ -0.49
PTPRE-203ENST00000442830 SDR39U1Q9NRG7 319 aaPredicted RBP11.98□□□□□ -0.49
PTPRE-203ENST00000442830 CORINQ9Y5Q5 1042 aa11.98□□□□□ -0.49
PTPRE-203ENST00000442830 ANK2Q01484 3957 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 TRAV36DV7A0A075B6V5 113 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 ZNF99A8MXY4 864 aaPredicted RBP11.97□□□□□ -0.49
PTPRE-203ENST00000442830 SNNO75324 88 aaPredicted RBP11.97□□□□□ -0.49
PTPRE-203ENST00000442830 UPK3AO75631 287 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 C8BP07358 591 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 VIMP08670 466 aaKnown RBP11.97□□□□□ -0.49
PTPRE-203ENST00000442830 BMP2P12643 396 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 PRKAR1BP31321 381 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 RPS5P46782 204 aaKnown RBP11.97□□□□□ -0.49
PTPRE-203ENST00000442830 POLR2JP52435 117 aaKnown RBP11.97□□□□□ -0.49
PTPRE-203ENST00000442830 SLC18A1P54219 525 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 NCALDP61601 193 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 CEP85LQ5SZL2 805 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 FAM91A1Q658Y4 838 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 VHLLQ6RSH7 139 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 H1FNTQ75WM6 255 aaPredicted RBP11.97□□□□□ -0.49
PTPRE-203ENST00000442830 MIER2Q8N344 545 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 ZNF786Q8N393 782 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 CLIP4Q8N3C7 705 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 GOLGA6L1Q8N7Z2 621 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 ANKS4BQ8N8V4 417 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 LINC01356Q8N9X3 169 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 PTDSS2Q9BVG9 487 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 NELFAQ9H3P2 528 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 WDR55Q9H6Y2 383 aaPredicted RBP11.97□□□□□ -0.49
PTPRE-203ENST00000442830 GPR35Q9HC97 309 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 TESQ9UGI8 421 aaKnown RBP11.97□□□□□ -0.49
PTPRE-203ENST00000442830 CORO2BQ9UQ03 480 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 CMAHPQ9Y471 501 aa11.97□□□□□ -0.49
PTPRE-203ENST00000442830 SVEP1Q4LDE5 3571 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 A0A096LPE4 126 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 IGHV2OR16-5A0A0B4J2B6 119 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 A0A1W2PPZ6 126 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 PRORSD1PA6NEY8 169 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 UBDO15205 165 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 TCF21O43680 179 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 APEX1P27695 318 aaKnown RBP11.96□□□□□ -0.49
PTPRE-203ENST00000442830 CALCRP30988 508 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 STX1BP61266 288 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 ARF1P84077 181 aaKnown RBP11.96□□□□□ -0.49
PTPRE-203ENST00000442830 IL1RL1Q01638 556 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 DAG1Q14118 895 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 RGNQ15493 299 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 CR1LQ2VPA4 569 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 SPATA21Q7Z572 469 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 UEVLDQ8IX04 471 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 SCAIQ8N9R8 606 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 UBASH3BQ8TF42 649 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 CKAP2Q8WWK9 683 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 SLC47A1Q96FL8 570 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 DOK1Q99704 481 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 MS4A5Q9H3V2 200 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 CRLF2Q9HC73 371 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 NKIRAS1Q9NYS0 192 aa11.96□□□□□ -0.49
PTPRE-203ENST00000442830 NBEAL1Q6ZS30 2694 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 A0A0A6YYJ9 748 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 SLC35F4A4IF30 521 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 CLIC1O00299 241 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 NR5A2O00482 541 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 SYNGR3O43761 229 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 C1QCP02747 245 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 KITP10721 976 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 PRG2P13727 222 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 NQO1P15559 274 aaKnown RBP11.95□□□□□ -0.5
PTPRE-203ENST00000442830 LSP1P33241 339 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 THBS4P35443 961 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 SRP14P37108 136 aaKnown RBP11.95□□□□□ -0.5
PTPRE-203ENST00000442830 CAPZA2P47755 286 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 HGFACQ04756 655 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 EGR4Q05215 589 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 SNTB2Q13425 540 aaKnown RBP11.95□□□□□ -0.5
PTPRE-203ENST00000442830 ADRM1Q16186 407 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 CEACAM16Q2WEN9 425 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 SLC9B1Q4ZJI4 515 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 ALG10BQ5I7T1 473 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 RPS26P11Q5JNZ5 115 aaPredicted RBP11.95□□□□□ -0.5
PTPRE-203ENST00000442830 SWT1Q5T5J6 900 aaKnown RBP11.95□□□□□ -0.5
PTPRE-203ENST00000442830 ULK3Q6PHR2 472 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 DHRS4L2Q6PKH6 230 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 ZNF627Q7L945 461 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 LINGO2Q7L985 606 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 TEX29Q8N6K0 151 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 ARIH2OSQ8N7S6 290 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 ANKRD42Q8N9B4 389 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 KTI12Q96EK9 354 aaPredicted RBP11.95□□□□□ -0.5
PTPRE-203ENST00000442830 OR2M2Q96R28 347 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 ASPNQ9BXN1 380 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 OCEL1Q9H607 264 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 SLC6A13Q9NSD5 602 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 B3GAT1Q9P2W7 334 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 SLC13A4Q9UKG4 626 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 NOX1Q9Y5S8 564 aa11.95□□□□□ -0.5
PTPRE-203ENST00000442830 TMEM120BA0PK00 339 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 M0R082 166 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 M0R233 179 aa11.94□□□□□ -0.5
PTPRE-203ENST00000442830 IFNGR1P15260 489 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms