RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 OR5T3Q8NGG3 340 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR1L4Q8NGR5 311 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 AP3S1Q92572 193 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 PNPLA2Q96AD5 504 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 COQ2Q96H96 371 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 CAPNS2Q96L46 248 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 MCRIP2Q9BUT9 160 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ST6GALNAC5Q9BVH7 336 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZYG11BQ9C0D3 744 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ALX4Q9H161 411 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 RANBP3Q9H6Z4 567 aaPredicted RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 DDX31Q9H8H2 851 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 C2orf42Q9NWW7 574 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF639Q9UID6 485 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ANAPC7Q9UJX3 599 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 NDRG2Q9UN36 371 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 MMACHCQ9Y4U1 282 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 CSDC2Q9Y534 153 aaKnown RBP3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 NPTNQ9Y639 398 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 USH1CQ9Y6N9 552 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 NPATQ14207 1427 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ADGRL3Q9HAR2 1447 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 ATP10DQ9P241 1426 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 TAF1LQ8IZX4 1826 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 VWDEQ8N2E2 1590 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 RAPGEF2Q9Y4G8 1499 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 MTUS2Q5JR59 1369 aa3.5□□□□□ -1.85
CDC42BPA-207ENST00000441725 FER1L5A0AVI2 2057 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 PPIAL4CA0A0B4J2A2 164 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 A0A1W2PQL4 384 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 C9JVG2 144 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 NBR2O15453 112 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 NOL4O94818 638 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 CRHP06850 196 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 GSTA1P08263 222 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 PPIAL4GP0DN37 164 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ETS2P15036 469 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 POU3F1Q03052 451 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ILF3Q12906 894 aaKnown RBP eCLIP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 TRAM2Q15035 370 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC9A3R2Q15599 337 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 C5orf47Q569G3 176 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 CCNJQ5T5M9 372 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR2A2Q6IF42 318 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 BHLHB9Q6PI77 547 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 NET1Q7Z628 596 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF575Q86XF7 245 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 FUNDC1Q8IVP5 155 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 OR4N5Q8IXE1 308 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 GATSQ8NAP1 163 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 KLHDC9Q8NEP7 349 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 RPLP0P6Q8NHW5 317 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 FAM222BQ8WU58 562 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 C22orf15Q8WYQ4 148 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC38A4Q969I6 547 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 BORCS5Q969J3 196 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 GLT1D1Q96MS3 346 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 MAPKAP1Q9BPZ7 522 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 COPS4Q9BT78 406 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 APOOQ9BUR5 198 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 C1QTNF4Q9BXJ3 329 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ABCB9Q9NP78 766 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 NRN1Q9NPD7 142 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 GID8Q9NWU2 228 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC2A8Q9NY64 477 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 PITPNC1Q9UKF7 332 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 EMCNQ9ULC0 261 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 TCF19Q9Y242 345 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 PIGLQ9Y2B2 252 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 GSTK1Q9Y2Q3 226 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZFYVE9O95405 1425 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 PLA2R1Q13018 1463 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 RNF17Q9BXT8 1623 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 NUP155O75694 1391 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 KIF24Q5T7B8 1368 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 CCDC7Q96M83 1385 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 RAB3GAP2Q9H2M9 1393 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ERICH3Q5RHP9 1530 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 A0A0J9YVX5 310 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 SLC5A10A0PJK1 596 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF99A8MXY4 864 aaPredicted RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 ZNF487B1APH4 448 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 STX7O15400 261 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 DPM1O60762 260 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 TRMUO75648 421 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 RPLP0P05388 317 aaKnown RBP3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 NGFRP08138 427 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 NUDT1P36639 197 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 CFHR2P36980 270 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 MAP3K8P41279 467 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 PKNOX1P55347 436 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 TMEM33P57088 247 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 RBX1P62877 108 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 PAX5Q02548 391 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 IRF4Q15306 451 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 TMEM249Q2WGJ8 235 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 DDI2Q5TDH0 399 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 SPESP1Q6UW49 350 aa3.49□□□□□ -1.85
CDC42BPA-207ENST00000441725 Q6ZPB1 254 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms