RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 CTHRC1Q96CG8 243 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ZHX1-C8orf76Q96EF9 292 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 TRMT61AQ96FX7 289 aaKnown RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 CHCHD6Q9BRQ6 235 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 CDADC1Q9BWV3 514 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 NUAK2Q9H093 628 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 SMURF2Q9HAU4 748 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 SLC23A1Q9UHI7 598 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF225Q9UK10 706 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 USP22Q9UPT9 525 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 GRIP1Q9Y3R0 1128 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 PCDHGB1Q9Y5G3 927 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 DMRT1Q9Y5R6 373 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ITPR3Q14573 2671 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 A0A1W2PP18 115 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 HSBP1L1C9JCN9 74 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 I3L521 148 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 GPIP06744 558 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ALDOCP09972 364 aaKnown RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ADORA3P0DMS8 318 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 FCGR1AP12314 374 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ANXA8P13928 327 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 HSD17B1P14061 328 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 S1PR1P21453 382 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 LCN1P31025 176 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 CD79BP40259 229 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 POU3F4P49335 361 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 XKP51811 444 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 FBXW4P57775 412 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ISL1P61371 349 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ID2Q02363 134 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF45Q02386 682 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 PRKCDQ05655 676 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 KRR1Q13601 381 aaKnown RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 NFYCQ13952 458 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ETFDHQ16134 617 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ACKR1Q16570 336 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 PRICKLE4Q2TBC4 344 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ANXA8L1Q5VT79 327 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 GLYATQ6IB77 296 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 BLOC1S3Q6QNY0 202 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 PLCZ1Q86YW0 608 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 HS3ST5Q8IZT8 346 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 MMP21Q8N119 569 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 MEIOBQ8N635 442 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ST8SIA2Q92186 375 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 GTPBP3Q969Y2 492 aaKnown RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 TESCQ96BS2 214 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ITCHQ96J02 903 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 COL21A1Q96P44 957 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 MMP28Q9H239 520 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 MUC13Q9H3R2 512 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ERVK13-1Q9NX77 482 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 TEX10Q9NXF1 929 aaPredicted RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 B3GNT2Q9NY97 397 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 VPS29Q9UBQ0 182 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 MRTO4Q9UKD2 239 aaKnown RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 CES1P1Q9UKY3 287 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 AUP1Q9Y679 476 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF780BQ9Y6R6 833 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 DCHS2Q6V1P9 2916 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 RAI1Q7Z5J4 1906 aaPredicted RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 NF1P21359 2839 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 EEF1E1-BLOC1S5C9J1V9 151 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 EEF1E1O43324 174 aaKnown RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 EMC8O43402 210 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 TMPRSS11DO60235 418 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ICOSLGO75144 302 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 TNFRSF21O75509 655 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 EEDO75530 441 aaKnown RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 IL6P05231 212 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 TRAPPC2P0DI81 140 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 TRAPPC2BP0DI82 140 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF708P17019 499 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ITGA2P17301 1181 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 SLC6A2P23975 617 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 S100A3P33764 101 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 DSCR4P56555 118 aaPredicted RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 DEFA1P59665 94 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 DEFA3P59666 94 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 PLCXD2Q0VAA5 305 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 DDX39BQ13838 428 aaKnown RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 AANATQ16613 207 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 DGAT2L6Q6ZPD8 337 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 Q6ZSR9 355 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF767PQ75MW2 155 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 CHMP1BQ7LBR1 199 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 OR4N5Q8IXE1 308 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 CLEC4FQ8N1N0 589 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ZNF454Q8N9F8 522 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 C9orf106Q8NAJ2 232 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 OR2T11Q8NH01 316 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ROBO4Q8WZ75 1007 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 TMBIM1Q969X1 311 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 TMEM68Q96MH6 324 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 NXF2Q9GZY0 626 aaKnown RBP5.42□□□□□ -1.54
PTPRR-204ENST00000440835 RNF167Q9H6Y7 350 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 ENOPH1Q9UHY7 261 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 PTGDR2Q9Y5Y4 395 aa5.42□□□□□ -1.54
PTPRR-204ENST00000440835 A0A1W2PNV4 684 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms