RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 FAM162AQ96A26 154 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 BOD1Q96IK1 185 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 LRR1Q96L50 414 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 KCTD14Q9BQ13 255 aaPredicted RBP9.2□□□□□ -0.94
MCF2L-216ENST00000439475 AMBRA1Q9C0C7 1298 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 CXorf56Q9H5V9 222 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 SPAG4Q9NPE6 437 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 SLC17A5Q9NRA2 495 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 FAIMQ9NVQ4 179 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 NDE1Q9NXR1 346 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 ADA2Q9NZK5 511 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF229Q9UJW7 825 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 RPS6KA6Q9UK32 745 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 POU2F3Q9UKI9 436 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 USP22Q9UPT9 525 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 MED31Q9Y3C7 131 aa9.2□□□□□ -0.94
MCF2L-216ENST00000439475 HEATR1Q9H583 2144 aaKnown RBP9.2□□□□□ -0.94
MCF2L-216ENST00000439475 RPL36A-HNRNPH2H7BZ11 118 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 M0R1B8 84 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 KPNA4O00629 521 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 NME4O00746 187 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 PLPP3O14495 311 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 ABCD4O14678 606 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 RNF13O43567 381 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 UPK3AO75631 287 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF432O94892 652 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF682O95780 498 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 PLAUP00749 431 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 IGF2P01344 180 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 MT-ND1P03886 318 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 IFNW1P05000 195 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 CD99P14209 185 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 FUT1P19526 365 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 OR1E2P47887 323 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 GSK3BP49841 420 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF83P51522 516 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 MNAT1P51948 309 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 CRYBA2P53672 197 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 FOXG1P55316 489 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 ROR2Q01974 943 aaKnown RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 POU3F1Q03052 451 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 BSPH1Q075Z2 132 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 PIN1Q13526 163 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF74Q16587 644 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 IFI44LQ53G44 452 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 GLYATQ6IB77 296 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 C8orf82Q6P1X6 216 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 ANKRD16Q6P6B7 361 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 SLC22A25Q6T423 547 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 CBLL1Q75N03 491 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 RRM2BQ7LG56 351 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 CYP4Z1Q86W10 505 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 TGIF2LYQ8IUE0 185 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 CCDC36Q8IYA8 594 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 CDK20Q8IZL9 346 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 OR1K1Q8NGR3 316 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 OR6N1Q8NGY5 312 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 MAGEE2Q8TD90 523 aaPredicted RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 TMEM239Q8WW34 195 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 GEMIN6Q8WXD5 167 aaKnown RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 SGTBQ96EQ0 304 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 TRMT61AQ96FX7 289 aaKnown RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 PRRC1Q96M27 445 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 ADAD1Q96M93 576 aaKnown RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 MOGAT1Q96PD6 335 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 KCNS3Q9BQ31 491 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 CISD1Q9NZ45 108 aaKnown RBP9.19□□□□□ -0.94
MCF2L-216ENST00000439475 B3GAT1Q9P2W7 334 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 SEC14L4Q9UDX3 406 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 TAGLN3Q9UI15 199 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 POFUT2Q9Y2G5 429 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 AKAP6Q13023 2319 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 SPG11Q96JI7 2443 aa9.19□□□□□ -0.94
MCF2L-216ENST00000439475 ITPR2Q14571 2701 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 CELSR2Q9HCU4 2923 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 CRYBG3Q68DQ2 2970 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 A0A1W2PR80 420 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 SLC35F4A4IF30 521 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 VSTM5A8MXK1 200 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 LRRN3E7EW58 273 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 C11orf98E9PRG8 122 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 SHOX2O60902 331 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 ENTPD5O75356 428 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 SERPINI2O75830 405 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 SERPINA1P01009 418 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 THY1P04216 161 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 TNFRSF1BP20333 461 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 PTNP21246 168 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 CD40P25942 277 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 PRRC2AP48634 2157 aaKnown RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 RPS4XP62701 263 aaKnown RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 MXRA7P84157 204 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 FOXD4Q12950 439 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 TBRG1Q3YBR2 411 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF672Q499Z4 452 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 PRR14LQ5THK1 2151 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 GKAP1Q5VSY0 366 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 PRSS57Q6UWY2 283 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 C16orf89Q6UX73 402 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 NANOGNBQ7Z5D8 188 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms