RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 DHRS9Q9BPW9 319 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 CCDC3Q9BQI4 270 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 HRASLS2Q9NWW9 162 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 NKIRAS2Q9NYR9 191 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 FLVCR2Q9UPI3 526 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 SLCO1B1Q9Y6L6 691 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 TGFBR3LH3BV60 316 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 HRKO00198 91 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 MEN1O00255 615 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 SULT1B1O43704 296 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 ZFPL1O95159 310 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 IFNA7P01567 189 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 PTH2RP49190 550 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 ERVK-25P63136 954 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 RPL6Q02878 288 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 EXOSC2Q13868 293 aaKnown RBP14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 CLLU1Q5K131 121 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 FCRLAQ7L513 359 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 UBALD2Q8IYN6 164 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 SLC22A18ASQ8N1D0 253 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 SPEM1Q8N4L4 309 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 DEFB119Q8N690 84 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 C7orf57Q8NEG2 295 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 OR2T35Q8NGX2 323 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 C3orf49Q96BT1 292 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 MAP6Q96JE9 813 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 DPCDQ9BVM2 203 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 RBCK1Q9BYM8 510 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 CHRDQ9H2X0 955 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 CLEC4MQ9H2X3 399 aaPredicted RBP14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 V9GY05 133 aa14.96□□□□□ -0.01
CLCNKA-203ENST00000439316 M6PRP20645 277 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 SSTR2P30874 369 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 RABIFP47224 123 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 VEGFCP49767 419 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 PPP1CAP62136 330 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 METTL11BQ5VVY1 283 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 Q6ZTK2 550 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 RIT1Q92963 219 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 CLDN23Q96B33 292 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 SPACA7Q96KW9 195 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 G6PC3Q9BUM1 346 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 MRI1Q9BV20 369 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 SLC19A3Q9BZV2 496 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 METTL17Q9H7H0 456 aaPredicted RBP14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 LIN7BQ9HAP6 207 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 NPDC1Q9NQX5 325 aaPredicted RBP14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 FOXJ3Q9UPW0 622 aa14.95□□□□□ -0.02
CLCNKA-203ENST00000439316 IGKV1D-42A0A075B6H8 117 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 A0A1W2PPC4 97 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 SERINC4A6NH21 518 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 ZSCAN5BA6NJL1 495 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 CSTAP01040 98 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 DCNP07585 359 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 CALCBP10092 127 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 LCN1P31025 176 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 MNDAP41218 407 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 MAGEB1P43366 347 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 BLVRAP53004 296 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 PRPS1P60891 318 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 MRPS10P82664 201 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 PUDPQ08623 228 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 SLC6A19Q695T7 634 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 PWWP2BQ6NUJ5 590 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 ZNF433Q8N7K0 673 aaPredicted RBP14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 MOSPD2Q8NHP6 518 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 FCAMRQ8WWV6 532 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 RBP7Q96R05 134 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 ALG12Q9BV10 488 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 OR10A4Q9H209 315 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 Q9N2J8 555 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 OR5V1Q9UGF6 321 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 UBQLN2Q9UHD9 624 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 FBXL3Q9UKT7 428 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 CEP192Q8TEP8 1941 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 A0A1B0GVT2 93 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 ANKRD20A5PA0PJZ0 165 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 CTSBP07858 339 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 RAB40ALP0C0E4 278 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 GRPRP30550 384 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 SLC25A1P53007 311 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 IGLV3-21P80748 117 aaPredicted RBP14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 SRSF5Q13243 272 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 POU4F3Q15319 338 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 STPG1Q5TH74 334 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 SFTPA2Q8IWL1 248 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 OR6V1Q8N148 313 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 EXD3Q8N9H8 876 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 SYNPRQ8TBG9 265 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 GPBAR1Q8TDU6 330 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 RAB40AQ8WXH6 277 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 FAM60AQ9NP50 221 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 RXFP3Q9NSD7 469 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 LRIT1Q9P2V4 623 aa14.94□□□□□ -0.02
CLCNKA-203ENST00000439316 NUP210LQ5VU65 1888 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 EML5Q05BV3 1969 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 TEX51A0A1B0GUA7 166 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 PSMD9O00233 223 aa14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 ARPC1BO15143 372 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-203ENST00000439316 PRAMEF2O60811 474 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms