RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ARPC3O15145 178 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 IDH3BO43837 385 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 IGHMP01871 453 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 F13BP05160 661 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 NOS3P29474 1203 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 C1DQ13901 141 aaKnown RBP18.5■□□□□ 0.55
CHD3-204ENST00000439235 POU4F3Q15319 338 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 MS4A18Q3C1V0 323 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 GPR139Q6DWJ6 353 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 FCRLAQ7L513 359 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 FAM81AQ8TBF8 368 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 ZPLD1Q8TCW7 415 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 ERMAPQ96PL5 475 aaPredicted RBP18.5■□□□□ 0.55
CHD3-204ENST00000439235 UCN2Q96RP3 112 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 TUBA1CQ9BQE3 449 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 SF3B5Q9BWJ5 86 aaKnown RBP18.5■□□□□ 0.55
CHD3-204ENST00000439235 ANKRD60Q9BZ19 345 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 PRRG4Q9BZD6 226 aa18.5■□□□□ 0.55
CHD3-204ENST00000439235 IGHV3-15A0A0B4J1V0 119 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 CLCA1A8K7I4 914 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 ZNF814B7Z6K7 855 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 IMPA2O14732 288 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 CYTIPO60759 359 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 SERPINI2O75830 405 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 FCGR2AP12318 317 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 ZNF43P17038 809 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 DAP3P51398 398 aaKnown RBP18.49■□□□□ 0.55
CHD3-204ENST00000439235 MYBPC1Q00872 1141 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 POU3F1Q03052 451 aaPredicted RBP18.49■□□□□ 0.55
CHD3-204ENST00000439235 PON3Q15166 354 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 EMC4Q5J8M3 183 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 ZNF691Q5VV52 312 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 GPAT4Q86UL3 456 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 CCDC103Q8IW40 242 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 C8orf59Q8N0T1 100 aaPredicted RBP18.49■□□□□ 0.55
CHD3-204ENST00000439235 ROBO4Q8WZ75 1007 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 PLEKHA8Q96JA3 519 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 B3GAT1Q9P2W7 334 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 GRHPRQ9UBQ7 328 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 LRRC42Q9Y546 428 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 IER3IP1Q9Y5U9 82 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 LOC400499M0QZD8 3231 aa18.49■□□□□ 0.55
CHD3-204ENST00000439235 AHRRA9YTQ3 701 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 ATXN7O15265 892 aaPredicted RBP18.48■□□□□ 0.55
CHD3-204ENST00000439235 TXNDC12O95881 172 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 PLGP00747 810 aaPredicted RBP18.48■□□□□ 0.55
CHD3-204ENST00000439235 IFNGP01579 166 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 EDN3P14138 238 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 ACADSP16219 412 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 ABOP16442 354 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 KLK2P20151 261 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 SDHAP31040 664 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 ERVK-25P63136 954 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 RBPJQ06330 500 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 TOP3AQ13472 1001 aaPredicted RBP18.48■□□□□ 0.55
CHD3-204ENST00000439235 FAM205BPQ63HN1 556 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 ACSM5Q6NUN0 579 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 GFRALQ6UXV0 394 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 USP51Q70EK9 711 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 FAM122BQ7Z309 247 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 HDDC2Q7Z4H3 204 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 FGD2Q7Z6J4 655 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 CHERPQ8IWX8 916 aaKnown RBP18.48■□□□□ 0.55
CHD3-204ENST00000439235 KDM8Q8N371 416 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 LSM14AQ8ND56 463 aaKnown RBP18.48■□□□□ 0.55
CHD3-204ENST00000439235 FAM57AQ8TBR7 257 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 RNF128Q8TEB7 428 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 TXNIPQ9H3M7 391 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 TVP23BQ9NYZ1 205 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 KLHL13Q9P2N7 655 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 KLHL21Q9UJP4 597 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 ADAM18Q9Y3Q7 739 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 HSPE1-MOB4S4R3N1 261 aa18.48■□□□□ 0.55
CHD3-204ENST00000439235 MPDZO75970 2070 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 SLC22A20A6NK97 555 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 FIGNL2A6NMB9 653 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 RIIAD1A6NNX1 92 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 DENRO43583 198 aaKnown RBP18.47■□□□□ 0.55
CHD3-204ENST00000439235 MPZL2O60487 215 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 RAMP1O60894 148 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 WDR1O75083 606 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 CLIC3O95833 236 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 TPOP07202 933 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 GABRA1P14867 456 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 MYF6P23409 242 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 PTGER4P35408 488 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 PCYT1AP49585 367 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 RPL27P61353 136 aaKnown RBP18.47■□□□□ 0.55
CHD3-204ENST00000439235 NFATC3Q12968 1075 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 SLC17A1Q14916 467 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 PDK3Q15120 406 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 RNPS1Q15287 305 aaKnown RBP18.47■□□□□ 0.55
CHD3-204ENST00000439235 SNAPC1Q16533 368 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 ACKR1Q16570 336 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 GTF2IRD2BQ6EKJ0 949 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 SLC35D2Q76EJ3 337 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 P4HA3Q7Z4N8 544 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 GTF2IRD2Q86UP8 949 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 MCEMP1Q8IX19 187 aa18.47■□□□□ 0.55
CHD3-204ENST00000439235 OR9K2Q8NGE7 335 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms